| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1495 |
|---|
| Symbol | |
|---|
| ID | 6877469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1455850 |
|---|
| End bp | 1456674 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642789363 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_002219930 |
|---|
| Protein GI | 198283609 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTA GTGGCGCACG CGCTACCGTC TATACCGTGC TGGGACTGTG GATGCTGGCA
CTGAGCGGCT GTGCAGGAGT CTCGACATCA CCCACTGCCA ACAGTACGGC GCCGTCCGCC
TCTGCGGCCT GCGCCACCCC CGCCCCTGAT CTGCACGCCG CCTATAACCG TCCTTATCAG
GTTCACGGCC GTATCTATGC GCCGCTGAAC AGCTCCGCCG GGTACGCCGT GCGCGGCATG
GCCTCCTGGT ATGGCTGGGA GTCCGGCTCC ACCACCGCCA TGGGCACCCC TTTCCGGCCA
CGCGCCTTCA GTGCCGCCAG CCGGGATCTG CCACTGCCGA CCTGCGCCCG GGTCACCAAC
CTCAGCAACG GCCGAAGTGT TATCGTGCTG GTCAATGATC GCGGGCCCTT TGTGGATGGC
CGCGCGATGG ACCTCTCCTA CGGAGCGGCC AACGCCCTGG GGATGGCGGG GCAAGGCGTC
GCCCCGGTGG AGATCGTGGC TCTGGCACCG GTAGCCGCGC CTCCGGCGGG TACATCCAGG
GGCACGGTTA CGGCGGCAGC ATTGCCCATG GCCCCGGAAA TACCGGCGCC GTCCCAAACC
TTTCTGCAAA CCGGGGCGTT CAGCCGGGTC AACAACGCCA CCCGTGAACG CAACCGTCTG
CTCCATGCCG GCATTCGCGG CGTGCTCATC GTGCCCGGAC TGGTGAACGG GCAGCAATAC
TACAAGGTAC AGATTGGCCC GCTGCCGGGT GGCGTCGCTG CGGTCCAGGT CATCGCCGAA
CTCAGGCAGA TGGGCTTTCA TGATTTTTAC AGCGTAGAAC AGTAA
|
|---|
| Protein sequence | MAVSGARATV YTVLGLWMLA LSGCAGVSTS PTANSTAPSA SAACATPAPD LHAAYNRPYQ
VHGRIYAPLN SSAGYAVRGM ASWYGWESGS TTAMGTPFRP RAFSAASRDL PLPTCARVTN
LSNGRSVIVL VNDRGPFVDG RAMDLSYGAA NALGMAGQGV APVEIVALAP VAAPPAGTSR
GTVTAAALPM APEIPAPSQT FLQTGAFSRV NNATRERNRL LHAGIRGVLI VPGLVNGQQY
YKVQIGPLPG GVAAVQVIAE LRQMGFHDFY SVEQ
|
|---|
| |