Gene Lferr_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1491 
Symbol 
ID6877465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1450464 
End bp1450814 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content57% 
IMG OID642789359 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002219926 
Protein GI198283605 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCA ACGATCGCGT CAACGAAATC GCTCAGCTCA CCGAACGCCT CAAAGACAAG 
TATCCCGCCG AAATCAATGC GTTCCTCGGT TTTATGGGGA AGACCGAGGG CAATCCGGCC
CTGGGCAAGG CGCAGAAGGA ACTGATCAAT GTCGCACTGT CCGTTGCCGC CCAATGTGAA
TGGTGTATCG CACTCCATGT CAAAGGCGCC GTAACCGCCG GGGCCACCCG CGATGAAATC
ATGAGTGCGG GTTTTTTGGC AGTGCTCATG CACGGTGGCC CGGCGCTCAT GTATCTGGTG
CGCCTGACCG AGGCCGTCGA TGCGTTTTTG CCGGAAGAAA GCCATGGATA A
 
Protein sequence
MSANDRVNEI AQLTERLKDK YPAEINAFLG FMGKTEGNPA LGKAQKELIN VALSVAAQCE 
WCIALHVKGA VTAGATRDEI MSAGFLAVLM HGGPALMYLV RLTEAVDAFL PEESHG