Gene Lferr_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1478 
Symbol 
ID6877452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1435689 
End bp1437116 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content64% 
IMG OID642789348 
Productpyruvate kinase 
Protein accessionYP_002219915 
Protein GI198283594 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC TACCAGTACA GCGCAGCAAA ATCGTCTGTA CCATCGGCCC GGCGTCCGAT 
GCACCGAAAA CACTGGAGCA GATGATCCGC GCCGGAATGA ACGTGGCCCG CCTGAATCTC
GCTCACGGCA CGCCGGATGA ACACCGCACC CGCATAGTCC GTATCCGGGC TGCGGCAGAA
AGGGTGGGAC AGCGGGTAGC CATCCTCGCC GATCTGCCCG GCCCTAAAAT CCGTATCGGT
GTGCTACCCG CCCCGGTCAC CCTCAAGCGC GGCAGTCAGG TACTCCTCGC CCCCGATGCA
CCCGGAACCC CGGAGCAGAT TCCCCTGGAG CTGCCCCGTC TTTCCCGACC TCTGGTCAAG
GGGGACACGA TATTTCTCAA TGACGGCTTC ATCGAGTTGC GTGTGGAGCA GCATGATCCT
GCCGGTATCC ATTGCCGGGT GGTGGTGGGC GGCGTGCTCC TCTCCCATAA GGGCGTGAAT
CTGCCCGGGG TGACGCTGGA AGGCGGCGCC CTCACCCCTG CCGACCGCGA GTTGCTGGCC
TTCGCGCTGG AGGCCGGCGT CGACGGGCTG AGTGTCTCTT TCGTGGAAAC GCCGGAGGAT
CTGCACACCG CCCGCCGGGA AGCGCGGGCC TTGGGTTATG AGCCCTTTCT GGTCGCCAAA
ATCGAAAGGG CTCGGGCCTG GAAACACATG GATGCCATCA TCGCCGCCGC CGACGGCATC
ATGGTGGCGC GTGGTGACCT TGGCGTGGAG GTGCCCATCG GGCAGATCGC GCTGATTCAG
AAACGCCTCA TCCGCAAGGC CCGTGCGGCA GGCAAGCCGG TCATCACCGC CACCCAGATG
CTGGAATCCA TGGTGCACAA TCGTCGCCCC ACCCGCGCGG AGGTCACCGA CGTCGCCAAT
GCCATCCTCG ACGGTACCGA CTGTGTCATG CTCTCCGAAG AATCCGCCAT GGGCGATTAT
CCGGTGGATG CAGTGAAAAT GCTGGCCGAA ATCGCCCGCA TCACCGAAAA ATCCCGATCC
GAGCTGAGCC CGCTCAGTGC AGAAACCCTG CACGACGCGC CCAGTGTGGA ATCGGTCATC
GCCTGGGATG TGCGCACCGC CGCCGAGCAT CTGAATCCAC TGTTTATCGT CACCCCCACC
GAAACGGGTA CCACCGCGGC CCGCATCGCA CGCTTCCGGC TGGTCCCGTG GATACTGGCT
ATCAGCCCGC AGGACCGCAC TTGCCAGCGC CTGTGCTTTC ATTACGGCGT GCATGCGGTA
GCCATGCCGA GCCCCGATCA GGGCTGGGAA CAGGCCGTCC GCCGCTGGCT GGTGACCCAC
GGCATCGAGA AGGGCCTCAT TCTCCTTACC CAGGGTCCAA GCCAGGGCCA CCCCGGCGGT
ACCAACCGAC TGGAAATCAT CCGCCTGGAA CAACCCGCCA TCCATTGA
 
Protein sequence
MMKLPVQRSK IVCTIGPASD APKTLEQMIR AGMNVARLNL AHGTPDEHRT RIVRIRAAAE 
RVGQRVAILA DLPGPKIRIG VLPAPVTLKR GSQVLLAPDA PGTPEQIPLE LPRLSRPLVK
GDTIFLNDGF IELRVEQHDP AGIHCRVVVG GVLLSHKGVN LPGVTLEGGA LTPADRELLA
FALEAGVDGL SVSFVETPED LHTARREARA LGYEPFLVAK IERARAWKHM DAIIAAADGI
MVARGDLGVE VPIGQIALIQ KRLIRKARAA GKPVITATQM LESMVHNRRP TRAEVTDVAN
AILDGTDCVM LSEESAMGDY PVDAVKMLAE IARITEKSRS ELSPLSAETL HDAPSVESVI
AWDVRTAAEH LNPLFIVTPT ETGTTAARIA RFRLVPWILA ISPQDRTCQR LCFHYGVHAV
AMPSPDQGWE QAVRRWLVTH GIEKGLILLT QGPSQGHPGG TNRLEIIRLE QPAIH