| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1476 |
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| Symbol | |
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| ID | 6877450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1432745 |
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| End bp | 1435270 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789347 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_002219914 |
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| Protein GI | 198283593 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.581638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATCG CCCCTTGCTA CCTGCTCCCG CAACTACCCG AATCACTGGC CGGCCTGGCG
GAACTTGCCC TCGACCTGCG CTGGTCCTGG AGCCATGTCT CCGACACCCT CTGGCAGCAT
ATTGCCCCCA AACTCTGGGA GCAGACCCAC AATCCGTGGC TGATTCTGCA GAACGCTGGC
AGCGAGGCAC TCCAGCAACT GGCCCAGGAT AAAGACTTCA TCGCGGAGTT GGAGGCCTTC
GTCACCGAAC ACCGCAACCG TCTCGCGCAA ACGTGCTGGT TCGGTAAAAC CTATCCTCAC
CCTCCCTTCC GTCAGGTGGC CTATTTCAGC ATGGAGTTTG GTCTATCCGA GTCCCTGCCC
ATCTACTCGG GCGGCCTGGG TATCCTTGCC GGCGATTGCC TGAAAACCGC CAGTGATCTC
GGTGTTCCTC TGCTCGGTAT CGGCCTGCTC TGGCAGCAGG GTTATTTCCG TCAGAGTCTG
GATGAGTGTG GTCGTCAGAT CGAACTCTAT CCGTACAACG ACCCCACCCA GATGCCCGTC
ACCCCGGTGC GGGACGCGGC GGGCGAATGG CTGCGTCTGG AAATGCCCTT TCCCGGCCGC
ACCGTCATCC TCCGCGCCTG GCAGGCACAG GTCGGCCGGG TGACCCTGTA TCTGCTCGAC
AGCAACGATC CCCTCAACGC CCCCGCCGAC CGGGGCATCA CCGCCGAGCT CTATGGCGGC
GGCCCGGAGA CCCGCCTGCA GCAGGAAATC TGCCTGGGCG TCGGCGGCTG GATGCTGCTG
CGCCGCCTGG GTATCCAGCC GGATATCTGC CATCTCAACG AGGGGCATGC AGCCTTCGCC
ATTCTCGCCC GGGCCTACAG CCATATGCGG GATCACGGTA CCGACTTCGC CTGCGCCCTC
ACCGCCACCC GCGCTGGCAA TATCTTCACT ACGCACACCC CGGTCTCCGC CGGTTTCGAC
CGCTTTCCGC CGGAACTGAT GACACGCTAC GTTGCCGGTG CCTCCGAGGC TTTCGGGATT
GACATAGAAA CCGTCCTTGC CTTAGGCCGG GAGCATCCCG AAGACCGCCG TGAACCCTTC
AACATGGCGT GGCTCGCCAT TCGCGGCAGC CTGACCGTCA ATGGCGTCAG CCGCCTGCAT
GGAACCGTCA GCCGTCGCTT ATTCCAGCCT CTGTTCCCAC GCTGGCCCGA AGACGAAGTT
CCCGTCACCC ACGTCACCAA CGGCGTGCAT ATGCCCTCCT GGGACTCCGC CGAAGCCGAC
GCCCTGTGGA CCACATACTG CGGCAAGTCC CGCTGGCTTG GGGACCTGAA GGATATCGAA
ACGGACTTTC GCCAGACCGC TGATGCCGAT ATCTGGCACC TGCGCAGCGT CGCGCGGCAG
GAGGTGATCC AATTCGCCCG CCAGCGCCTG CAGCAGCAAC TGGCGGCAAC CTATGCGCCC
GAAAGAGAGT GTGAACAAGC GAAAACGGCG CTCGACCCCA ACACCCTCAC CATCGGTTTC
GCCCGCCGCT TTGCCGCCTA CAAGCGCCCC AACATGCTCC TGAGCGACCC GGATCGTCTG
TACCGCCTGC TGAACAACCC GCGCTATCCC GTACAACTGC TGATCGCGGG CAAGGCTCAT
CCCCAGGATG GCGCCGGTAA GGCCATGATC CAGCAGTGGA CCCAGTTCAT TCACCAGTAT
CCCGACCTGG CCGGGCGCGT CGTCTTCATC ACCGACTATG ACATGCTGGT CGCCGAACAC
CTGGTGCAGG GTGTCGACCT GTGGATCAAT ACACCGCGCC GCCCCTGGGA AGCGAGCGGT
ACCAGCGGCA TGAAAGTATT GGTCAATGGC GGCCTCAATC TCTCGGAGCT GGACGGCTGG
TGGGCCGAGG CCTATTGCCC GGAGGTCGGG TGGGCCCTGG GCGACGGGCA GGAACATGAT
ACCGATCTGG CATGGGACCA ACAGGAAGCA CAGCAGCTCT ATCGCCTGCT GGAAGACGAA
GTCGTGCCCC TCTTTTACCA CCAACGCGAT GCCAACGGCT GCCCGTGCGG CTGGGTCGGC
AAAATCCGCG AAAGCATGGG CCGCCTGACC CCGCAATTCA GCACCAATCG CATGTTGCAG
GAATATGTAT CCACCCTCTA CGTCCCGGCC GCACGACTTC TGGCCGCGCG CAGCGACCGC
GCCACCGTTG AAGGCATCTG CAAATGGCAG CATGAAATTC GCCAGCACTG GCAAAGCGTG
CATTTTGGCG AACTGAATGT GCAAAGCGAT ACCGATACCC ACCATTTTCA GGTGCCCGTA
TATCTGGATG ACCTCAACCC AGACGCCGTT GCGGTACAGC TCTTCGCCAA CGGCGAGGGG
GGACAGTGCC CGACCCTCTA TACCATGACG CGCGGAGAAG CCCTGAGCGG CGCCATCAAC
AGCCACAATT ATCACTGTAC AGTGCCGGCC CGCCACCCGG TGGAGGCTTT TACACCCAGG
ATCATCCCAT ATCGCGAGGG ATGCCTGGTC CCCCTGGAAA GTACAGAGAT ACTCTGGTAT
CGCTGA
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| Protein sequence | MTIAPCYLLP QLPESLAGLA ELALDLRWSW SHVSDTLWQH IAPKLWEQTH NPWLILQNAG
SEALQQLAQD KDFIAELEAF VTEHRNRLAQ TCWFGKTYPH PPFRQVAYFS MEFGLSESLP
IYSGGLGILA GDCLKTASDL GVPLLGIGLL WQQGYFRQSL DECGRQIELY PYNDPTQMPV
TPVRDAAGEW LRLEMPFPGR TVILRAWQAQ VGRVTLYLLD SNDPLNAPAD RGITAELYGG
GPETRLQQEI CLGVGGWMLL RRLGIQPDIC HLNEGHAAFA ILARAYSHMR DHGTDFACAL
TATRAGNIFT THTPVSAGFD RFPPELMTRY VAGASEAFGI DIETVLALGR EHPEDRREPF
NMAWLAIRGS LTVNGVSRLH GTVSRRLFQP LFPRWPEDEV PVTHVTNGVH MPSWDSAEAD
ALWTTYCGKS RWLGDLKDIE TDFRQTADAD IWHLRSVARQ EVIQFARQRL QQQLAATYAP
ERECEQAKTA LDPNTLTIGF ARRFAAYKRP NMLLSDPDRL YRLLNNPRYP VQLLIAGKAH
PQDGAGKAMI QQWTQFIHQY PDLAGRVVFI TDYDMLVAEH LVQGVDLWIN TPRRPWEASG
TSGMKVLVNG GLNLSELDGW WAEAYCPEVG WALGDGQEHD TDLAWDQQEA QQLYRLLEDE
VVPLFYHQRD ANGCPCGWVG KIRESMGRLT PQFSTNRMLQ EYVSTLYVPA ARLLAARSDR
ATVEGICKWQ HEIRQHWQSV HFGELNVQSD TDTHHFQVPV YLDDLNPDAV AVQLFANGEG
GQCPTLYTMT RGEALSGAIN SHNYHCTVPA RHPVEAFTPR IIPYREGCLV PLESTEILWY
R
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