Gene Lferr_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1474 
Symbol 
ID6877448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1430640 
End bp1432172 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content59% 
IMG OID642789345 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_002219912 
Protein GI198283591 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.942704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGCG TTCACGCGCC AATGCTCGCA AGCGGAAATT TCGATAAAAC GGGCAGCCCG 
CATCTTCTCG CCATTACTGT CGCCGTAATG GCCTGCATCA TCATGAATGT TCTGGACATC
ACGATCGTCA ACGTGGCGCT GCCGCACATG GAGGGGTCGC TTCACGCCAA CAGCGATCAG
ATTACCTGGG CACTCACCAC CTACATGCTG GCCATGGTCA TCGTCACTCC CTTGACCGGC
TTACTGGTCG AGCGCTTCGG ACAACGCCGG CTCATCCTGT GGAGCGTGGC CGGCTTCCTG
GTCTGCTCGG TCATGAGCGG ACAATCCCAC AGCCTCACGG AAATCGTTCT TTGGCGTTTC
CTGCAGGGAG CACTGGGCGC CTCTCTGGTA CCTGTCGGGC AGGCCATTCT GGTTCAGGCG
TATCCCCGGG AGAAACGGGG GGTAGCCATG GCGACCCTGG GCATGGGCAC CATGCTCGGT
CCCATCGTCG GTCCGGTGCT CGGCGGCTAT CTCACCGAAA ATCTCTCCTG GCGTTGGTGT
TTCTACGTCA ATATACCCAT TGGCATCATC GCCTTTACCA TGCTGATTTT TTACATCCCC
CGCTTTGGCA AAAGCGAACA TCCCCGGCCG ATTGATTGGC TTGGATTCGT ATGGATGGCC
ATCGGGCTGG GTGCGTTGCA GATGATGCTC AGCCTCGGCG ATCAGGACGG CTGGTTGAGC
TCCGACTTCA TCATCATCCT GATGTTGTCG GCGGGCACCG GCATTTTTCT CTTTGTACTG
CGTTCGCTCA GCGTCGCCCA TCCGCTGGTC GACTTGCGCC TGCTCAAGGA TCGCTCCCTG
ACCCTGGGCA GTGCGGGTAT AGGTTTATTC GGCCTCGCGC TTTATGGGAC CATGGTGATT
CTGCCCATCT ATCTGCAGGA TTATATGGGG TACGAACCGC AAACCGCAGG CCTTGCCATG
GCTCCCCAGG GCCTGGGCTC CTGGATTTCC ATGTGGATGG CGGGACGCCT GCTCAATCGC
GGGGCCAACC CCCGCTGGAT GATCATGGCC GGAGTTTTTT TGGGTGCCAC GGGCACCTGG
ATCAGCCTCT CCTATAACCT GCAGGTAAGC CCTGCCTGGA TCATCTGGCC TGGGGTGATC
CGGGGCCTCG GTCTCGGCCT GGTATCCATC CCCCTATTTA CGCTGGCTTT TGCGACCCTC
AGCAAGGAGC AGACGCCGGA GGGATCGGGG ATATTCAATC TCATGCGCAA TCTGGGCGGT
TCTGTGGGCA TTGCCATCGT CTCCACCATC ATGACCGAAG AGGCGCAGGC GGCGTGGAAC
CAGATGGGAG GGCATATCAG CCCCTTCAAT GCGGCATTGC CGCGTTACCT GGGTGGCGCC
GGTTTGCGTC AGGGAAATCT GACCTGGCAG GTGCTGGGCC GGGTTCTGGC GCAGCATGCG
GCAATGCGTG GTATACTGGA TGCGTTCATG TTCCTGTTCT GGAGCTTTTT GGTCGTGATG
CTCATCGCGC TACTGATGAA GGATAAATCC TAG
 
Protein sequence
MDGVHAPMLA SGNFDKTGSP HLLAITVAVM ACIIMNVLDI TIVNVALPHM EGSLHANSDQ 
ITWALTTYML AMVIVTPLTG LLVERFGQRR LILWSVAGFL VCSVMSGQSH SLTEIVLWRF
LQGALGASLV PVGQAILVQA YPREKRGVAM ATLGMGTMLG PIVGPVLGGY LTENLSWRWC
FYVNIPIGII AFTMLIFYIP RFGKSEHPRP IDWLGFVWMA IGLGALQMML SLGDQDGWLS
SDFIIILMLS AGTGIFLFVL RSLSVAHPLV DLRLLKDRSL TLGSAGIGLF GLALYGTMVI
LPIYLQDYMG YEPQTAGLAM APQGLGSWIS MWMAGRLLNR GANPRWMIMA GVFLGATGTW
ISLSYNLQVS PAWIIWPGVI RGLGLGLVSI PLFTLAFATL SKEQTPEGSG IFNLMRNLGG
SVGIAIVSTI MTEEAQAAWN QMGGHISPFN AALPRYLGGA GLRQGNLTWQ VLGRVLAQHA
AMRGILDAFM FLFWSFLVVM LIALLMKDKS