| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1474 |
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| Symbol | |
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| ID | 6877448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1430640 |
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| End bp | 1432172 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789345 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002219912 |
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| Protein GI | 198283591 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.942704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGCG TTCACGCGCC AATGCTCGCA AGCGGAAATT TCGATAAAAC GGGCAGCCCG
CATCTTCTCG CCATTACTGT CGCCGTAATG GCCTGCATCA TCATGAATGT TCTGGACATC
ACGATCGTCA ACGTGGCGCT GCCGCACATG GAGGGGTCGC TTCACGCCAA CAGCGATCAG
ATTACCTGGG CACTCACCAC CTACATGCTG GCCATGGTCA TCGTCACTCC CTTGACCGGC
TTACTGGTCG AGCGCTTCGG ACAACGCCGG CTCATCCTGT GGAGCGTGGC CGGCTTCCTG
GTCTGCTCGG TCATGAGCGG ACAATCCCAC AGCCTCACGG AAATCGTTCT TTGGCGTTTC
CTGCAGGGAG CACTGGGCGC CTCTCTGGTA CCTGTCGGGC AGGCCATTCT GGTTCAGGCG
TATCCCCGGG AGAAACGGGG GGTAGCCATG GCGACCCTGG GCATGGGCAC CATGCTCGGT
CCCATCGTCG GTCCGGTGCT CGGCGGCTAT CTCACCGAAA ATCTCTCCTG GCGTTGGTGT
TTCTACGTCA ATATACCCAT TGGCATCATC GCCTTTACCA TGCTGATTTT TTACATCCCC
CGCTTTGGCA AAAGCGAACA TCCCCGGCCG ATTGATTGGC TTGGATTCGT ATGGATGGCC
ATCGGGCTGG GTGCGTTGCA GATGATGCTC AGCCTCGGCG ATCAGGACGG CTGGTTGAGC
TCCGACTTCA TCATCATCCT GATGTTGTCG GCGGGCACCG GCATTTTTCT CTTTGTACTG
CGTTCGCTCA GCGTCGCCCA TCCGCTGGTC GACTTGCGCC TGCTCAAGGA TCGCTCCCTG
ACCCTGGGCA GTGCGGGTAT AGGTTTATTC GGCCTCGCGC TTTATGGGAC CATGGTGATT
CTGCCCATCT ATCTGCAGGA TTATATGGGG TACGAACCGC AAACCGCAGG CCTTGCCATG
GCTCCCCAGG GCCTGGGCTC CTGGATTTCC ATGTGGATGG CGGGACGCCT GCTCAATCGC
GGGGCCAACC CCCGCTGGAT GATCATGGCC GGAGTTTTTT TGGGTGCCAC GGGCACCTGG
ATCAGCCTCT CCTATAACCT GCAGGTAAGC CCTGCCTGGA TCATCTGGCC TGGGGTGATC
CGGGGCCTCG GTCTCGGCCT GGTATCCATC CCCCTATTTA CGCTGGCTTT TGCGACCCTC
AGCAAGGAGC AGACGCCGGA GGGATCGGGG ATATTCAATC TCATGCGCAA TCTGGGCGGT
TCTGTGGGCA TTGCCATCGT CTCCACCATC ATGACCGAAG AGGCGCAGGC GGCGTGGAAC
CAGATGGGAG GGCATATCAG CCCCTTCAAT GCGGCATTGC CGCGTTACCT GGGTGGCGCC
GGTTTGCGTC AGGGAAATCT GACCTGGCAG GTGCTGGGCC GGGTTCTGGC GCAGCATGCG
GCAATGCGTG GTATACTGGA TGCGTTCATG TTCCTGTTCT GGAGCTTTTT GGTCGTGATG
CTCATCGCGC TACTGATGAA GGATAAATCC TAG
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| Protein sequence | MDGVHAPMLA SGNFDKTGSP HLLAITVAVM ACIIMNVLDI TIVNVALPHM EGSLHANSDQ
ITWALTTYML AMVIVTPLTG LLVERFGQRR LILWSVAGFL VCSVMSGQSH SLTEIVLWRF
LQGALGASLV PVGQAILVQA YPREKRGVAM ATLGMGTMLG PIVGPVLGGY LTENLSWRWC
FYVNIPIGII AFTMLIFYIP RFGKSEHPRP IDWLGFVWMA IGLGALQMML SLGDQDGWLS
SDFIIILMLS AGTGIFLFVL RSLSVAHPLV DLRLLKDRSL TLGSAGIGLF GLALYGTMVI
LPIYLQDYMG YEPQTAGLAM APQGLGSWIS MWMAGRLLNR GANPRWMIMA GVFLGATGTW
ISLSYNLQVS PAWIIWPGVI RGLGLGLVSI PLFTLAFATL SKEQTPEGSG IFNLMRNLGG
SVGIAIVSTI MTEEAQAAWN QMGGHISPFN AALPRYLGGA GLRQGNLTWQ VLGRVLAQHA
AMRGILDAFM FLFWSFLVVM LIALLMKDKS
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