| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1468 |
|---|
| Symbol | |
|---|
| ID | 6877442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1426373 |
|---|
| End bp | 1426906 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642789339 |
|---|
| Product | segregation and condensation protein B |
|---|
| Protein accession | YP_002219906 |
|---|
| Protein GI | 198283585 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAG CGCTCCTGGC ATTGTTTTTG TCCAGCGCCG AGCCGCTTAC TCGCGCGCGC
CTGGCCGATA TTTTCGACGG CGACCCTGGC TGCGCGGGAT GGGAGGCGGC GCTGGACATG
CTGTTGGCTA CCGGCGAGGG ACCTCTGCAA CTCGTCTGTG TAGCGGGTGG CTATCGTCTG
CAGATTCATC CGCGTCACAA CGCCCTCGTG GCGCGCCTCC ATATGGAGCC ACCACGGCCT
TTGTCGCGGG CCACGTTGGA AACCCTGGCG GTGATTGCCT ATCAGCAGCC GGTGACCCGT
CCGGAAATCG AGCACTGGCG TGGGGTTGCG GTCAGCGTGC AGATCATGCA GCAGCTTCAG
GAGCGGGGCT GGATCACCAC CAGCGGACAC CGGGATACAC CGGGTCGCCC CGCGCTTTGG
GTGACAACAC CCGGTTTTCT GGAGCATTTT TCATTGCCGT CGCTGGCTGC GTTGCCGGAG
ATCGTGACGA TGGAAGAGGG CCAGACGGAT ATACAGGCAG GCATAACGGA CTGA
|
|---|
| Protein sequence | MREALLALFL SSAEPLTRAR LADIFDGDPG CAGWEAALDM LLATGEGPLQ LVCVAGGYRL
QIHPRHNALV ARLHMEPPRP LSRATLETLA VIAYQQPVTR PEIEHWRGVA VSVQIMQQLQ
ERGWITTSGH RDTPGRPALW VTTPGFLEHF SLPSLAALPE IVTMEEGQTD IQAGITD
|
|---|
| |