| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1461 |
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| Symbol | |
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| ID | 6877435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1419018 |
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| End bp | 1421375 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642789332 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002219899 |
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| Protein GI | 198283578 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGA TCAACCGGAT AAGCATTGGG CCGATCGACA ACGGCACACC CGACAACAGG
CGAAGTTCAT GTTCAGGCTA TTTTCTGCTG GGGATGCTCC TTGCAATGTG GACGATTCCG
CTGCTGGCCC AGGCATCGGG CTTGCAACTT GCGACGGCTA ACGACACGTT GCAGACCATC
CACCGCGGGC TGTCACAGCA TGCGGATACG CGGCAACTTC AGAACTGGCA GAAAAGCGTA
ACCGCCATTG GCCATGATGC AGACGTCTGC ATGACCGAAA AAAACAGCAA TCTGAGCCAG
ACGGACAAAG CCCTGGGCAT TCTTGGACCC GCCGTCGCCG GCGAGCCCGA GAATCTGACG
GTTTTACGCC AGAAGCTGCA GAATGAGCAG AAAACTCTCA GCGGGGAACT CGCCACCTGT
AAGATTCTCG CCATTGCGAG TGCGGATCTG GGCCGACAGA TCCGCGAACA ACGTGATGCG
CTACTGGCCC AAATGCTGTT GCGCCACGAT CACGACATCT GGCAGCAGGC CGTAGCCCTT
CTGTCTACTC CTGCCACTAC CTGGATTGCC GAGCGGCATT TCTGGCTTAC CTGGAATGAA
CATTCCATTT TTGCCCAGAA GGGCCTGCAA CTCTCCGCCG GGATCGGTAT CTTCCTGTTT
GCCCTGCTGT CGTTTCTGCG GGTGCCTTTG GCCAAGGCCA TTCATCGCAC GCGGGATTTA
TCCGATACGC AGCGAAATTT CTACCATTAT GCGCCCCTGC TGGGAGGCGT CGCCGCGGCT
GCAGCCTCAA GCTATATTAC AGACACCTTT TCGCCTCTCA TTGCCCTCAT ATTCGGCACC
TGGGGCACCT ATGCCGCTAT CTCCATGCTG CTCGCGTGGG CCCTGCGGTC GTCCGGCATC
GTCAGCCGCC ATTTTTCCTG GGAGCAGCAG ACGCTGCGCT CCGCACTGCG AACCCTGCGG
TTCATTGCCC TCCTCTCCCT GTTCGGACTC GTGTGGATAG GCATTTCCCC TCAGGATCCC
TTGTCCGCAG CAGACCAGGC CTTTTTCGTG TCCGCATATC ATCTAGTCCT CCTCAGCGCG
GTGTTATGGC TGGTCTGGCG AATGGGCGTG CAAAAGCCTT TCCGATCTCA TCCGCTGCCC
AGGATGGTCC TGCTTCTGGC CCTGATCGCT ACCGCCATAT GTACGCTGTC CGGTTATCGC
AACCTTTCCA ATTATCTGTT CTTCGGCCTG CTGACGTCCC TGCTGGCCCT CAGCATGGGG
TTCCTGTTGT CCTGGGGGCT TGCCGAATTC TGGATGCGGG CGGCACAAAA ATCCGGTTTC
TGGCAACATT TCCTGCGCCG CCGCCTACGC GTGAAGGAAG ATCAGCCCCT GCCATGGATA
ACCTGGTTCA GTACGATAAG TTACACCGCC GTATGGTTGG GGGTGGCGGC CTTCGTCCTG
CATGCCTGGG GCCTGACGCA TACAGGATTT ACCTTGATCT GGAAATATTT TATCACCGGA
TTCACCATTG CCGGTTTTCA CATCCAGCCC TTCCGCTGGG TGATCGCCGC GATACTGCTC
GCCATCCTGT TCAACATCAA CGCCCTGGTC CAGAAATACC TGTCTGATAA CTCGCGGATT
ATCAACCATA TGGAAAGCGG AGCCCGCCAC TCCGTATTAT CCATCCTCCG CTATACCGGG
TTCATTATCG CGGTGCTGAT TGCACTCTCT ACCGCCGGTG TCGCACTCGG TAATCTTGCC
ATCGTCGCCG GCGCCCTATC GGTAGGCATC GGCTTTGGCC TGCAAAATAT CGTCAATAAT
TTTGTGTCTG GTCTGATTCT GCTATTGGAG CGTCCCATTC GTGTTGGTGA CTGGATTCAG
GTGGGGAACA CTCAGGGATA TGTGCAGAAG ATGAGCATCC GTTACACTCT GATCCTTACT
TTTGACCGCA CTGAAGTCTT CGTTCCTAAT TCTGAACTGA TCTCTGGCCA GGTGACCAAC
TGGATGTACA CAAATAGCGT GTTGCGCCTG ATGATCCCCT TCAGCATTGC CCATGATGCC
GATATCCCGC TGGTAAAGCA GCTGCTGGTA GCGGAAGGTC AAAACCACCC CGACGTCCTG
CAAGATGATC CGCGCGGTAT TCCGCCCACC GCGCTGTTAC TGGATGTCAG CGAAAATGCC
CTGCAATTCT ATCTGCGGGT GTATCTGGAC GACTGTAACA AGAGTTATAA CGTGCAGACC
GACCTGCGTG CTTCCGTGGT GGAAAGTCTG CTCCGCCATA ACATAACACT GGCGCACCAG
CAGCAGGACG TCCACATTAT TCCCGGTCGG ATTTTACCTA TGGACGGGAA TATGGCTCCG
CCGACGGGGG AGCATTAA
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| Protein sequence | MRVINRISIG PIDNGTPDNR RSSCSGYFLL GMLLAMWTIP LLAQASGLQL ATANDTLQTI
HRGLSQHADT RQLQNWQKSV TAIGHDADVC MTEKNSNLSQ TDKALGILGP AVAGEPENLT
VLRQKLQNEQ KTLSGELATC KILAIASADL GRQIREQRDA LLAQMLLRHD HDIWQQAVAL
LSTPATTWIA ERHFWLTWNE HSIFAQKGLQ LSAGIGIFLF ALLSFLRVPL AKAIHRTRDL
SDTQRNFYHY APLLGGVAAA AASSYITDTF SPLIALIFGT WGTYAAISML LAWALRSSGI
VSRHFSWEQQ TLRSALRTLR FIALLSLFGL VWIGISPQDP LSAADQAFFV SAYHLVLLSA
VLWLVWRMGV QKPFRSHPLP RMVLLLALIA TAICTLSGYR NLSNYLFFGL LTSLLALSMG
FLLSWGLAEF WMRAAQKSGF WQHFLRRRLR VKEDQPLPWI TWFSTISYTA VWLGVAAFVL
HAWGLTHTGF TLIWKYFITG FTIAGFHIQP FRWVIAAILL AILFNINALV QKYLSDNSRI
INHMESGARH SVLSILRYTG FIIAVLIALS TAGVALGNLA IVAGALSVGI GFGLQNIVNN
FVSGLILLLE RPIRVGDWIQ VGNTQGYVQK MSIRYTLILT FDRTEVFVPN SELISGQVTN
WMYTNSVLRL MIPFSIAHDA DIPLVKQLLV AEGQNHPDVL QDDPRGIPPT ALLLDVSENA
LQFYLRVYLD DCNKSYNVQT DLRASVVESL LRHNITLAHQ QQDVHIIPGR ILPMDGNMAP
PTGEH
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