Gene Lferr_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1450 
Symbol 
ID6877424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1406967 
End bp1408319 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content62% 
IMG OID642789321 
ProductPolynucleotide adenylyltransferase region 
Protein accessionYP_002219888 
Protein GI198283567 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGAA CCGCGCTGAA CTCTCACCAG ACCATATCCG GCACCGACAA CCCCCCATCC 
GCTGCACAGA TCCACCGGTT GCTGCGGCAG CATTGGGGCG AGGGGCGCCT GCAGCGCCTG
TACGACATCG GCAGAACCGC AGCAAGTCTC GGCACGCCGG CCTATCTGGT GGGTGGTTGC
GTTCGCGACC TTCTGCAAAA CCATCCTGCA CCGGACACAG ATCTGGCCAT AGAGGGGGAT
GTCCGCGCCG TCGCTGAAGC TTGTACCGCC CAGTTGTCCG GCATGCAATG TACCTATCAT
CCACAATTTG GTACCGCCAT CCTCGAGTAC CCCGATGGAT TCCGGCTGGA TCTGGCGCGT
TGCCGCGTCG AGCACTACCC TGCACCCGCC GCGCTGCCGG AAGTACGGCC CGGCGATATC
GTCGCGGATC TCGCCCGCCG CGATTTCACC ATCAATGCCA TGGCCATCTC CCTGGACCCG
GGCAGTTTTG GCGGCTTCCT AGACCCCCAT GGGGGACGCA TGGATCTGCA ACACGGCCTG
CTGCGCGTGC TGCACCCCCT TTCCTTTGTG GATGACCCCA CCCGCATGCT GCGCGGACTG
CGTTTTGCCG TGCGTTTTCA CCTGCGACTG GAACCTGGTA CCCATGTTCT GCTCAAGACG
GCGCTGGCCC GGGATATTTT CGCCCGGCTC AGCGGCGCAC GTTTATGGCG TGAGCTGAAG
TATGTGCTTG AACTAGAGGA TCTCGCCGGG GTTTTCGAAA AGTTGGATGC CTGGCAGTTA
TGGCCTCTGT TGCGTCCGGT ACCACCGGAA CCGGAGACGC TCCTTGCCAG CATGAAGCGC
GGTCGACAGG AGATCACCTG GTTTCACCGC CACTTCCCTG GCGAGAGACT TTTCGATACC
GCCGTGTTGC TGACCCTGAT CTGGCGGCAT ATCCCTTGGG CGGAGGCGGA GAAACGCTTA
CACTGTTGGC CTGTGGCCGA CGGTCACCAT ATTCTGAGGG ATCTGCAATT CCTGTCCGAA
GTGTCGGCGG CCCTGGCGCA GGCCACTCGC CCCAGTGCGG CGGCGCAATT ATGGGCGTCG
CTGTCGTTAC CCGGCATACT CGCGCTGCTT GCGGAGCATC CGGAAAGCGA CGCAGTTGCC
GAAAGTGGCC GCCACTATCT GCTGAAGCAG CGTGCGCTGA AATCGCCGCT CAGCGGCCGG
GATCTGCAAG CCATGGGCTT GGCGCCCGGC CCTCAACTTG GTAAGGTACT GCGTCGCCTG
TACGAAGCCC ACCTGGATGG CGAGATCGAA GATAAGGAAA CCGCGCGACA ATGGCTTATC
AGACAAGGCA TCCTGCCGTC CATCCAACCG TGA
 
Protein sequence
MGRTALNSHQ TISGTDNPPS AAQIHRLLRQ HWGEGRLQRL YDIGRTAASL GTPAYLVGGC 
VRDLLQNHPA PDTDLAIEGD VRAVAEACTA QLSGMQCTYH PQFGTAILEY PDGFRLDLAR
CRVEHYPAPA ALPEVRPGDI VADLARRDFT INAMAISLDP GSFGGFLDPH GGRMDLQHGL
LRVLHPLSFV DDPTRMLRGL RFAVRFHLRL EPGTHVLLKT ALARDIFARL SGARLWRELK
YVLELEDLAG VFEKLDAWQL WPLLRPVPPE PETLLASMKR GRQEITWFHR HFPGERLFDT
AVLLTLIWRH IPWAEAEKRL HCWPVADGHH ILRDLQFLSE VSAALAQATR PSAAAQLWAS
LSLPGILALL AEHPESDAVA ESGRHYLLKQ RALKSPLSGR DLQAMGLAPG PQLGKVLRRL
YEAHLDGEIE DKETARQWLI RQGILPSIQP