Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1444 |
Symbol | |
ID | 6877418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1399935 |
End bp | 1400336 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789315 |
Product | Smr protein/MutS2 |
Protein accession | YP_002219882 |
Protein GI | 198283561 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.361484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAACC CCGACCCGAA TACGCATCCC GTACAGGCAC CCATTGACGG AGTCCTCGAC CTGCATACCT TTCGCCCCCA GGAAGTGCCC GACCTGATCC GCGAATATCT TCATGCCTGC CGGATCAGGC ATATCACGAA AATCCGTATC ATCCACGGTA AGGGCAAAGG CGTGCTGCGC GAAACGGTAC ATGCCATTCT CCGGCGCGAG CCCGTGGTCC GGGGCTTTCA TCTGGCCAAT GATCGCAGCA GTTGGGGCGC AACGCTGGTG GATATTTATC CGCCCAATGT CTCCCTGCCA CCGCGCCGGC CCCCGGAGGC AAAAGTACAC CGGCCGGGGC GGGTGCCGGG CTGGTACCGG CTGCTACACC GCATTTTCGT CAGGCATCGA GGCGGGATAT GA
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Protein sequence | MKNPDPNTHP VQAPIDGVLD LHTFRPQEVP DLIREYLHAC RIRHITKIRI IHGKGKGVLR ETVHAILRRE PVVRGFHLAN DRSSWGATLV DIYPPNVSLP PRRPPEAKVH RPGRVPGWYR LLHRIFVRHR GGI
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