Gene Lferr_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1444 
Symbol 
ID6877418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1399935 
End bp1400336 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID642789315 
ProductSmr protein/MutS2 
Protein accessionYP_002219882 
Protein GI198283561 
COG category[L] Replication, recombination and repair 
COG ID[COG1193] Mismatch repair ATPase (MutS family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.361484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAACC CCGACCCGAA TACGCATCCC GTACAGGCAC CCATTGACGG AGTCCTCGAC 
CTGCATACCT TTCGCCCCCA GGAAGTGCCC GACCTGATCC GCGAATATCT TCATGCCTGC
CGGATCAGGC ATATCACGAA AATCCGTATC ATCCACGGTA AGGGCAAAGG CGTGCTGCGC
GAAACGGTAC ATGCCATTCT CCGGCGCGAG CCCGTGGTCC GGGGCTTTCA TCTGGCCAAT
GATCGCAGCA GTTGGGGCGC AACGCTGGTG GATATTTATC CGCCCAATGT CTCCCTGCCA
CCGCGCCGGC CCCCGGAGGC AAAAGTACAC CGGCCGGGGC GGGTGCCGGG CTGGTACCGG
CTGCTACACC GCATTTTCGT CAGGCATCGA GGCGGGATAT GA
 
Protein sequence
MKNPDPNTHP VQAPIDGVLD LHTFRPQEVP DLIREYLHAC RIRHITKIRI IHGKGKGVLR 
ETVHAILRRE PVVRGFHLAN DRSSWGATLV DIYPPNVSLP PRRPPEAKVH RPGRVPGWYR
LLHRIFVRHR GGI