| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1430 |
|---|
| Symbol | |
|---|
| ID | 6877404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1385570 |
|---|
| End bp | 1386853 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642789302 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002219869 |
|---|
| Protein GI | 198283548 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.151309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCTT ACACAGACCT ATCAATCGAC GATTACCCGA TATTGGTGAC GAAGAGCTTT
GTCATTCCGG AAGTAATGAC GGTGTTCCAG GAATCCGATA AGCAAGTCAT TACTAGGAAA
GTGTCCGAGA GAAATGAACT GGTATGGGGA AAGGTAAGTC CAGATGAAGA CCATGATGAG
GTTGCAGTCA CTTATAACTG CGAAGTCTGG AAGGCAATCG AGCGACTCGA CGTTATGGGT
TTTACGATGC GTCGAGTACG CAAAGATTAT GAGGATGTAC GAATATCGGA AGTAGAAAAA
TACACATCTT GGCTTGGCGA CAATGACGAT GGTTCGTGCT GCGATGATCT TAACTATTTC
ACCAACCTCA CATTTGACCG CTATGTGGAA GCACTTCGCA CCGTGCTGAC GCAGCGCATC
CGGCCTCGCC AATTTGGCGA CACGGACATC GATCTTGACC CCGTCGTGAA AAGAATTGTT
GGTGATCATG AACGCTATGC TTTTGGCTTT CTTGGCACAG ACATTCGCTC CTTCATTCGA
GTAGCTTGTG AGCTTGTTCC GAATAATAGC CAATTAGTAC AGGACATTAC CGGGGTGGCG
CACGCTGGAT ACTACGAGGA GGACGAACCG GTTTGCGCCA ATTCAACCCG AGCACTTACC
GCAGGGCACC CAGAAAATTC AGCTCGGATC ATCCTCACAG AAGGTTCAAC CGACGTTGAG
ATTCTACGAG AGGCACTTGC ACTGCTCTAT CCACATCTTT TCGGCTACTA CACCTTTCTG
GATTTTGCGT CTGCTCGGCC CCAAGGCGGA GCGGGAAGTC TTATCACAAC AGTCAAGGCA
TTTGTGGCGG CGGGCATTTC AAATAGAATA ATTGCCGTCT TCGACAATGA CACTGCAGCA
TGCGATGCAA GGCGTTCGCT TGCTTCACTC CAACTTCCGC AAAACATTGC TGTGTGCAGC
TACCCCAATC TAAGTTCGTT GGAGGCCTAT CCCACCTTAG GTCCTAGCGG TCTTGTCCCG
CTCAATGTCA ATGGCCTGGC GGCCAGCATC GAGCTTTATC TCGGAAAGGA CATACTCACC
AACGGCGAAG ACTTTCCCGT TCAATGGAAA GGCTATGTCG AATCACTCGG AAAGTATCAA
GGTGAAGTGA TGTACAAGGG GCGCCTCCAA GAACGATTCC GCGAAAAAAG TGCACGATGC
AAATCATCTA CAGATGAGAT CAACCGCTAC GACTGGTCTG GCCTGAAAGC AATTCTCGAA
GTAATTTTCC ATGCCTTCGA TTAA
|
|---|
| Protein sequence | MGSYTDLSID DYPILVTKSF VIPEVMTVFQ ESDKQVITRK VSERNELVWG KVSPDEDHDE
VAVTYNCEVW KAIERLDVMG FTMRRVRKDY EDVRISEVEK YTSWLGDNDD GSCCDDLNYF
TNLTFDRYVE ALRTVLTQRI RPRQFGDTDI DLDPVVKRIV GDHERYAFGF LGTDIRSFIR
VACELVPNNS QLVQDITGVA HAGYYEEDEP VCANSTRALT AGHPENSARI ILTEGSTDVE
ILREALALLY PHLFGYYTFL DFASARPQGG AGSLITTVKA FVAAGISNRI IAVFDNDTAA
CDARRSLASL QLPQNIAVCS YPNLSSLEAY PTLGPSGLVP LNVNGLAASI ELYLGKDILT
NGEDFPVQWK GYVESLGKYQ GEVMYKGRLQ ERFREKSARC KSSTDEINRY DWSGLKAILE
VIFHAFD
|
|---|
| |