Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1428 |
Symbol | |
ID | 6877402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1384274 |
End bp | 1384912 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642789300 |
Product | restriction endonuclease-like protein |
Protein accession | YP_002219867 |
Protein GI | 198283546 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.352885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA CTGCATCCGA GTTCCTCGCC TTTGCCAGAG TCGTTCAGTC TGAGGAATGG CGCACGCTGT CGCAAAAGAA GGCGTATCGA TTCACGGTCG AGGATCGGGG GCTCAGGGTC GTTCCTTCAA CTGGTGACGA ACGCTTGGTT TCAAACTGGG AGATTGCTCG CTTCTGTGAG ACATACAGCC AATCAAACTC CGTCAAGACC AAGGACTACT CCAAACTCTT CAACAAATCG TACCTTCTGC CCGTCGCTCA CTCCTTCGAT CCGAAGCGGG TTGAGTTTTC GCTCGCGGAT GAGGTTGTGG ACACTTCCGA TCTGCACGAG GGGGCAGTGC GGTTGGTCTC CGTAAACGCC TATGAACGAA ATGCTGAGGC GAGGCGACGG TGTGTGGAAG CTCACGGTTC AAGTTGCGTC GTCTGTGGGT TTTCTTTCGC GCAGGTTTAC GGCGATGTTG CAGCAGGCTT CATTCACGTC GATCATTTGT CGCCCATTGC GCTCAAGGGT GGCAATTACA AGGTCGACCC TGTGTCAGAT TTGCTTCCTG TGTGTCCCAA CTGCCATGCA GTCATTCATC TGCGGGGCGG GTGCATGTCG ATCGAAGAAC TGAGGGGCCA TCTCCGTGCG CGTACCTAA
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Protein sequence | MKFTASEFLA FARVVQSEEW RTLSQKKAYR FTVEDRGLRV VPSTGDERLV SNWEIARFCE TYSQSNSVKT KDYSKLFNKS YLLPVAHSFD PKRVEFSLAD EVVDTSDLHE GAVRLVSVNA YERNAEARRR CVEAHGSSCV VCGFSFAQVY GDVAAGFIHV DHLSPIALKG GNYKVDPVSD LLPVCPNCHA VIHLRGGCMS IEELRGHLRA RT
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