| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1395 |
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| Symbol | |
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| ID | 6877369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1351397 |
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| End bp | 1352857 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642789268 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002219835 |
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| Protein GI | 198283514 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCG GCAAAGACTT TTTCTCCGAT TTGCTCCAGA AAAAGAAAGG GCTGCTCCCG
GCAGGGCAAC AGCCCGCCGG GGATAGCCGC AAAGGCCCTG GCGGGCAGCA AGACCCTTGC
GGGCAGCCAG GCCCTAGCAG GCCGCAAGGC CCACAAGTCA GTCAGCCCGG GATCGAGGTC
AAGCCGGACA GGGACCGGAT GGCGACGCGC ATCAAGCGGA CGCCGCTCTA TATTGCGGCT
GCGGTGGTCG GACTGGGCGC CTATGGCGGC TATGAGTATC TGCAAAGTCA CCCGATGTTC
GGGAACGCCA AGCCGCAGGT GCAGGCCAAA ACTATCCAGC CGGCGAGCGG GACTGGCGCA
CCGGTCGCCC CTGCGCACCG GAAGCAGGTC CACAAGCCCA CCGTGCCTGG AGGGGCGTCG
GACACGTCGG CAACCGCGGC CACGAACAGT GATGCTGACC AGTCTCATCC AGCGAAGGCT
CCAGCGTCCA CAGTGCCCAA AAAGAATCCC TACGCAACGC AGGACGCCGC CTTCGCGTCC
GCCCTGGGTA CGGGAAGCGC CGGGAGCGGG GCCGGTGAGG GCCTTGCCTG GAAAACGCCG
GAGTCAACGC CATCCGCACA GACTCCGACA GTTCTCCCTA CGGCCCTGCC GGGTGCATCC
CTGCCGGGAG CATCCCTGCC GGACGCGGAA CCGTCGGCAG CGAAGAAAAC AAAGAAGAAG
ACCCCGCCGT CCCTGGTGAC CCGGGAGACG AGCCCCTACG AGATTCTTTC CGGGTCGGTC
ATTCCCGCCG TTTTGCAGAC GGGCATCAAG AGCTATCTGC CGGGAGAGAT CACGGCGGTG
GTCAGCCAGA ACGTCTATTC GTCCGTGAAC GGGGCAACGC TCCTGATCCC TGCCGGCGCC
AAATTGGTGG GCACCTATGA CACACAGACG GCCCTGGGCA TCAACCGGCT GGCCGTTGCC
TGGACGCGCA TCGAGTTTCC GAACGGCACC ACCATGAACC TGCCGGGATA CGAAGGGGCA
GGTGGTGCTG GATACGCCGG CTTCGCCGGG GAGGTCAATG ACCACACCTG GCTGATCTTC
AAGAATGCGT TATTGATGTC GATCGTGGAT GCCGGGATGG CGATTGCTTC TCCGTCCACA
TCGACCAGTG TGACAGGCCA GATGTCCGGG AATGTGGCGC TTCAGGACAG CGAGCAAGCC
CTGGCACAGA CCTTTGGGGA AGCCGAATCC CAGCTGCTGG AAAAGTACAT CGACATCGCA
CCCACGATCA CCATTCCCAC CGGCTATCTG TTCTCGGTGG TGGTGGCGCA TGACATGGTC
TTCCCCGGCC CCTACGACCC GGCCATGCAG ACGGGATCGG CCATGGTCGA CCAGGCGCTT
GGGCCGAATC TCAATCCCTA TGGGTTACGC CCTGCCAAGG GGCTGCGCCC TGCCAAGGGG
TTGCACCCTG CGAAGGGGTA A
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| Protein sequence | MKSGKDFFSD LLQKKKGLLP AGQQPAGDSR KGPGGQQDPC GQPGPSRPQG PQVSQPGIEV
KPDRDRMATR IKRTPLYIAA AVVGLGAYGG YEYLQSHPMF GNAKPQVQAK TIQPASGTGA
PVAPAHRKQV HKPTVPGGAS DTSATAATNS DADQSHPAKA PASTVPKKNP YATQDAAFAS
ALGTGSAGSG AGEGLAWKTP ESTPSAQTPT VLPTALPGAS LPGASLPDAE PSAAKKTKKK
TPPSLVTRET SPYEILSGSV IPAVLQTGIK SYLPGEITAV VSQNVYSSVN GATLLIPAGA
KLVGTYDTQT ALGINRLAVA WTRIEFPNGT TMNLPGYEGA GGAGYAGFAG EVNDHTWLIF
KNALLMSIVD AGMAIASPST STSVTGQMSG NVALQDSEQA LAQTFGEAES QLLEKYIDIA
PTITIPTGYL FSVVVAHDMV FPGPYDPAMQ TGSAMVDQAL GPNLNPYGLR PAKGLRPAKG
LHPAKG
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