| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1393 |
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| Symbol | |
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| ID | 6877367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1349261 |
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| End bp | 1350376 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642789266 |
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| Product | Conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_002219833 |
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| Protein GI | 198283512 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA AGACATTGCT TTCTTTGGGG CTTGCCGTCC TTCCTGGATT GGCGCTGGCA
GGCGTGGATA CTGGACTCCC TGCGGTGAAC CCGATCAGTT CGCTGCAGGG AAAACCACCA
ATACAGCCTG CAGGGACGAA AACCGGTTCC GCCCATCCGT CCACGACACC ATCCGCATCT
GGCGGCACCA CGTCTGCGGG CCAGAAAGTC CCGGCCATCT CCCCGGAGGC TGCCGCGCGG
ATGGCAACGG CGCATGTGTG GCAACAGTCC ATCGCCACCC CGCCCGAAGG CCCAGAAAGT
GCTGCAACCA GAGCGTTGGC ACGTCAGTCG CTGACGGCGT CCCAGGCGAT GGACGACACC
CTTCCGGTGA TCGGCGGCGC GAACGGAACC GTCGACAGCT TGGCCGGTCG GCCCGTGCTG
GTTTGCTCGC CGCTGCACAC CTGCATCATC GAGCTGCCCG AGGGCGTCAA GCCCGTGACG
ACCGTCGGCG TCAGCAAGTC GGAATGGAAT GTGCAGCAGG CGCTGGTGGG GAAACAGCCG
GAAATCTTCC TGAGCCCGAA ATTCCAGGGT CTCCACCAAA ACATCGTGGT AGCCGCAACC
GACCAGGGCA GGCCCATCAA CTATGAAATC CGTCTGGTCA GTGACGCGGT ACGCTACATT
CCCGCCCTGA AGATCGAGGA TAGCGGGGGC GAGGTCCGTT CCTGGAAAAC AGACTTGCAG
TCAGCAGACT CGCGGACGGC AGACAACGCA CCAACGGATC AGTCGGCTGC CGACCATAAA
GGCAATGTAC TGCCTCTGCC CAATATCCGT CTCAACCACG TCAATCTTCG CTGGTCCATT
CATTGCGGTG GCGGCGGATG GTTCCGTTCC AGCGACTGCA AACCGATCCG TCCATTGCGC
GTGTATGACG ATGGGACCCA TACCTTCATC GACATGCCCC AGGGGCTGGC GAGCCATGGG
GGCTTTCCCA TCCTGCAAGC CCGCAATGCC AGCGGACACC TGATCGGAGT CGATACCCAG
ATCCGGGGCA ACACCTATGT CGTCGATTCA GTTCCTGCCG AGATCCTGTT ACGGCTGGGT
TCTGAGGTGG TCACCATCCA TCAGGAGGGG AAGTAA
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| Protein sequence | MKTKTLLSLG LAVLPGLALA GVDTGLPAVN PISSLQGKPP IQPAGTKTGS AHPSTTPSAS
GGTTSAGQKV PAISPEAAAR MATAHVWQQS IATPPEGPES AATRALARQS LTASQAMDDT
LPVIGGANGT VDSLAGRPVL VCSPLHTCII ELPEGVKPVT TVGVSKSEWN VQQALVGKQP
EIFLSPKFQG LHQNIVVAAT DQGRPINYEI RLVSDAVRYI PALKIEDSGG EVRSWKTDLQ
SADSRTADNA PTDQSAADHK GNVLPLPNIR LNHVNLRWSI HCGGGGWFRS SDCKPIRPLR
VYDDGTHTFI DMPQGLASHG GFPILQARNA SGHLIGVDTQ IRGNTYVVDS VPAEILLRLG
SEVVTIHQEG K
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