Gene Lferr_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1382 
Symbol 
ID6877356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1338834 
End bp1339130 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content64% 
IMG OID642789255 
Productmicrocompartments protein 
Protein accessionYP_002219822 
Protein GI198283501 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG TCAGCGGAGT GGCACTGGGT ATGATCGAGA CGCGCGGCCT GGTGCCAGCG 
ATTGAAGCGG CAGACGCGAT GACCAAGGCG GCGGAAGTGC GTCTGGTGGG CCGCCAGTTC
GTGGGCGGTG GGTATGTCAC CGTACTGGTG CGCGGTGAGA CCGGTGCGGT AAATGCGGCG
GTACGCGCCG GAGCAGATGC GTGTGAGCGT GTCGGTGACG GACTGGTAGC CGCCCATATC
ATCGCCCGCG TACACAGTGA AGTGGAGAAT ATTCTGCCCA GCAGCCCGGT GGAATGA
 
Protein sequence
MANVSGVALG MIETRGLVPA IEAADAMTKA AEVRLVGRQF VGGGYVTVLV RGETGAVNAA 
VRAGADACER VGDGLVAAHI IARVHSEVEN ILPSSPVE