Gene Lferr_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1381 
Symbol 
ID6877355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1338450 
End bp1338788 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content65% 
IMG OID642789254 
Productmicrocompartments protein 
Protein accessionYP_002219821 
Protein GI198283500 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.640555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATG TCAGCGGAGT GGCACTGGGT ATGATCGAGA CGCGCGGCCT GGTGCCGGCG 
ATTGAGGCGG CGGACGCGAT GACCAAGGCG GCAGAAGTGC GCCTGGTGGG CCGCCAGTTC
GTGGGCGGCG GCTATGTCAC CGTGCTGGTG CGCGGTGAGA CCGGTGCGGT GAATGCGGCG
GTACGGGCAG GGGCGGATGC GTGTGAGCGT GTTGGCGACG GACTGGTGGC CGCCCATATC
ATCGCCCGCG TGCACTCAGA GGTAGAAAAC ATACTACCGA AGACGCCCGA TGCCGGTGAC
AGCGGCCTGG ATGGCGTGGT CAGCCAGTCA CTCAGCTAG
 
Protein sequence
MINVSGVALG MIETRGLVPA IEAADAMTKA AEVRLVGRQF VGGGYVTVLV RGETGAVNAA 
VRAGADACER VGDGLVAAHI IARVHSEVEN ILPKTPDAGD SGLDGVVSQS LS