Gene Lferr_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1376 
Symbol 
ID6877350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1335967 
End bp1336770 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content57% 
IMG OID642789249 
ProductCbbQ/NirQ/NorQ domain protein 
Protein accessionYP_002219816 
Protein GI198283495 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.428584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCAG AAATTGATCA ATATCTCGTT CGTAATATGC CTTATTACCG CACCGTAGCC 
GACGAAGTCG ACCTGTACGA AGCCGCCTAT TCGGTACGCA TGCCAATGAT GCTGAAAGGA
CCCACAGGCT GCGGGAAAAC GCGCTTTATT GAATACATGG CGTGGAAACT GGGTAAGCCA
CTGATCACTG TGGCGTGTAA CGAAGATATG ACGGCATCCG ACCTGGTCGG CCGTTTCTTG
CTCGACGCTT CCGGCACCCG CTGGCAGGAC GGCCCGCTGG CCATTGCCGC GCGTTTTGGA
GCCATCTGCT ATCTCGACGA AGTGGTGGAA GCCCGCCAGG ACACCACGGT GGTGATCCAC
CCGCTCACCG ACGCGCGGCG TGTGCTGCCG CTGGAGAAGA AGGGCGAACT GGTGCAGGCC
CATCCCGATT TCCAGATAGT AATTTCCTAC AACCCGGGCT ATCAGAGTCT GATGAAAGAC
CTGAAACAGT CTACCAAACA GCGTTTCGGT GCACTGGATT TCAACTATCC TGCACACGAC
ATAGAAACCG AGATCGTCGC CCACGAAACC GGCGTCAGCG TTGAAATCGC CGGCAAGCTG
GTGTCCATCG CCGAACGCGC GCGCAACCTC AAGGGACATG GTCTCGACGA GGGTATCTCC
ACACGCATGC TGATCTACGC TGGCAGTCTC ATTACCAAAG GTGTGGAGCC CCTGGCGGCG
TGCCACATGA CGTTGGTGCG CCCGATCACC GATGATCCCG ACATGCGCGA TGCGCTTGAC
GCGGCGGTGA GTACGTTTTT CTGA
 
Protein sequence
MSPEIDQYLV RNMPYYRTVA DEVDLYEAAY SVRMPMMLKG PTGCGKTRFI EYMAWKLGKP 
LITVACNEDM TASDLVGRFL LDASGTRWQD GPLAIAARFG AICYLDEVVE ARQDTTVVIH
PLTDARRVLP LEKKGELVQA HPDFQIVISY NPGYQSLMKD LKQSTKQRFG ALDFNYPAHD
IETEIVAHET GVSVEIAGKL VSIAERARNL KGHGLDEGIS TRMLIYAGSL ITKGVEPLAA
CHMTLVRPIT DDPDMRDALD AAVSTFF