Gene Lferr_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1373 
Symbol 
ID6877347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1331508 
End bp1332296 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID642789246 
Productdethiobiotin synthase 
Protein accessionYP_002219813 
Protein GI198283492 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA TTCAGCACGC CGTTGAGCTG GATCTGGCGG GCCTCACCGG ACTATTTGTC 
ACTGGTACTG ACACGGGCGT CGGCAAAACC TGGGTGGCGG TGGCACTGAC CCGTCTCCTG
GTGCAGCGGG GCCTATCGGT GCGCCCGCGC AAACCGGTGG AATCGGGGTG TGCCTCGGGC
GAGGATGGCC TGCTGCCCCA GGACGCGGCC GCGCTCTGGA AGGCTGCGGA CAGTACCGAA
TCGCTGCAAC AGGTTTGTGC TTATCCACTG CGGGCGGCGC TCTCACCGGA GCGGGCTGCT
GCCCTGGAAG GTCGGACGCT GACTCTGGAT CAACTGGTAA CCGCTTGCCA GTCGGGCATT
GGCGCAGACG ACTTCTTGCT AGTGGAAGGG GCTGGCGGCC TGCTCTCCCC GCTGGCGGCG
GGAACCACCA ACGCCGACTT GGCCGCCGCA CTGCGGCTGC CTGTGCTGGT AGTAGCCGCC
GATCGCCTCG GCGTCATCAA CCACACCCTG CTCACTGTGG AGGTATTACA GCACCGGGCA
TTACCACTGG TTGGCGTGGT GCTGAACCAG ACAGGGCCGG TGATTGATCC GCTCTTGGAT
AATGCCGCAG ATTTGGCATG CTGGCTGGAC TGTCCGGTAG AGCGAATACC GCATCGGTCG
GGGCACCACG CCACCACGTG GATGGGCATT GGTCCGTTTC TTCATGGCCT TGCCAGCCGG
CTTGCAGCCG CCCATACCGC GCCAAAAGCA ACCCCTCCCA TCACCGCAAA CTGTGCGGCG
CAGAAATGA
 
Protein sequence
MKSIQHAVEL DLAGLTGLFV TGTDTGVGKT WVAVALTRLL VQRGLSVRPR KPVESGCASG 
EDGLLPQDAA ALWKAADSTE SLQQVCAYPL RAALSPERAA ALEGRTLTLD QLVTACQSGI
GADDFLLVEG AGGLLSPLAA GTTNADLAAA LRLPVLVVAA DRLGVINHTL LTVEVLQHRA
LPLVGVVLNQ TGPVIDPLLD NAADLACWLD CPVERIPHRS GHHATTWMGI GPFLHGLASR
LAAAHTAPKA TPPITANCAA QK