Gene Lferr_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1365 
Symbol 
ID6877339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1324554 
End bp1325333 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID642789238 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002219805 
Protein GI198283484 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.490803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAT CTAACACCGA TAAAAACTCC TCCATCCAGG TGATCACCCG CTTGCGTGCT 
CTGCTGGATG CCCTCGCGGC GGAAGGGGGG AGCGCACCAC TCAAAATACT CGCCGCCGTC
ACCGGACTCG CACCCTCCAC CGCCTTCCGC ATTCTGGCCT CAGCACAGGA CAACCAACTG
ATCGCTCGCG ATGCTGGCGG CCATTACCGC TTCGGCCAGC GCTTGCAAGA CTGGGCGCAG
CTCGCCCATG GCCGCAGCGA CCTACGCGCC GTCGCCCGGC CCATCATGGC CTGGCTGCGC
GATCAGGTGC AGGAGACGGT GAATCTTACC ATCCAGGAGG GCGACGAAGT GATCTATGTA
GAGCGCGCCA CCTCGTCGCG GATGATGCGG GTGGAGCAGG TGATCGGCAG TCGCGCGCCG
CTACATACCA CCGCCGTCGG CAAGCTCATG CTGGCGCTGA ATGGCGAAGC TGCTGTCCAA
AGTTACGCTA CCCGCACCGG CTTGCCGGCG CTTACTGTTC ATACCCTGCG CCAGGCCGAT
GCCCTCTGGG AAAACGCCAG AAGCGGACTT GAACGTGGCT ATGCACTGGA CAATGAGGAA
GCCGAGATTG GCGTCGGTTG TCTCGGCGTG CTGCTCCACA GCCGATTGCC CTGGAATGCC
GGCCTCAGTA TCTCCGCGCC TATTGAGCGG CTCCAGGAAA GCTGGGTACC GATGCTACAG
GAGGCTGCGC GGCGGATAGA TAGGGGCCAC CAGAAAAATG ATGTACCGTC CATAAGTTGA
 
Protein sequence
MSTSNTDKNS SIQVITRLRA LLDALAAEGG SAPLKILAAV TGLAPSTAFR ILASAQDNQL 
IARDAGGHYR FGQRLQDWAQ LAHGRSDLRA VARPIMAWLR DQVQETVNLT IQEGDEVIYV
ERATSSRMMR VEQVIGSRAP LHTTAVGKLM LALNGEAAVQ SYATRTGLPA LTVHTLRQAD
ALWENARSGL ERGYALDNEE AEIGVGCLGV LLHSRLPWNA GLSISAPIER LQESWVPMLQ
EAARRIDRGH QKNDVPSIS