Gene Lferr_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1360 
Symbol 
ID6877334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1317080 
End bp1318330 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content61% 
IMG OID642789233 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_002219800 
Protein GI198283479 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC ATATCGCCCC CCGCTTCCAA AATGATCCCA GCGTAACCGA AGCCGATGCC 
ATACTGCGCA GCTGCGTCCA CTGCGGCTTC TGTACCGCCA CCTGCCCCAC CTACCAGATT
CTCGGCGATG AACTGGATGG TCCGCGTGGT CGCATCTACC TCATCAAGGA ATTCCTCGCC
GGTGCCCCGG CCACGGAACA TACCCTGGAA CATCTGGACC GCTGTCTCAC CTGCCGCGCC
TGCGAAACCA CCTGTCCTTC CGGCGTGCGC TACGCGCGGC TGGCGGAAAT CGGCCGCGCG
CATATTGAGG CAGAAGTGGG CCGCTCGACA CTGGAGCGGC TGAAGCGCCG CCTGCTGCGC
GCCATTGTTC CCCATCCCGA GCGCTTCCAT CTGCTGGTAC GACTCGGTGA CATCTTTAAG
CCCCTGTTGC CGGATGCTTT GGCGCGCATG GTTCCGACCC TGCCCAAGCC CCGACTGAAG
GCGCCCCGGG CCACGTTCCA TGCGACGCAC CGGGTCATTG CCCTCGCCGG ATGCGTGCAA
AGCGTCATGA CCCCCTCGAC CGGGGTGGCC CTGGAGCAAA TACTCGGCTC CCTCGGTGTG
GCTGTCGATG TGCCTGCCAG CGCCGGTTGC TGTGGTGCCC TCAGCCTGCA CCTCAACGCA
CACAATGAAG CGCACAACTA TATGCGTCGC AATATCGACG CCTGGTGGCC GCTGATCGAA
GCTGGCGCTG AAGCCATTCT GGTCAGCGCC AGCGGCTGTG GCAGCATGGT CAAGGAATAT
GGGGAAGCGT TACAAAACGA CCCGCACTAT GCTGAAAAGG CTGCGCGTGT CGCCGCTCTG
GCCTGCGATC CCAGTGAATG GCTCCTGGAA CGCACCGGGG AAATTCCTTT CGTGGCCGCT
AATCGCGGCA CAGTCGCCTT CCACGCGCCC TGCTCCCTGC AACATGCCCA GCGCTTGCAA
GGCGGGGTCG AAACGCTCTT ACAACAAGCC GGCTACCAAT TGACCAGTGT TCGAGATAGC
CATCTTTGTT GTGGTTCGGC AGGCAGTTAC TCTATTTTGC AGCCTACCCT GTCCCAGCAG
CTACGCAATC AGAAACTGGA GGCTTTGCAG GCAGGGCAGC CGGACTACAT CTCCACGGCC
AACGTCGGCT GCCAGATACA CCTTCAAAGC GGCAGTGAGA CACCGGTTTG CCATTGGCTG
GATCTGTGTG CCGATGCCCT GGCTCCTCTG TTGGAGGATT GTAGCGACTG A
 
Protein sequence
MQTHIAPRFQ NDPSVTEADA ILRSCVHCGF CTATCPTYQI LGDELDGPRG RIYLIKEFLA 
GAPATEHTLE HLDRCLTCRA CETTCPSGVR YARLAEIGRA HIEAEVGRST LERLKRRLLR
AIVPHPERFH LLVRLGDIFK PLLPDALARM VPTLPKPRLK APRATFHATH RVIALAGCVQ
SVMTPSTGVA LEQILGSLGV AVDVPASAGC CGALSLHLNA HNEAHNYMRR NIDAWWPLIE
AGAEAILVSA SGCGSMVKEY GEALQNDPHY AEKAARVAAL ACDPSEWLLE RTGEIPFVAA
NRGTVAFHAP CSLQHAQRLQ GGVETLLQQA GYQLTSVRDS HLCCGSAGSY SILQPTLSQQ
LRNQKLEALQ AGQPDYISTA NVGCQIHLQS GSETPVCHWL DLCADALAPL LEDCSD