| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1359 |
|---|
| Symbol | |
|---|
| ID | 6877333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1315135 |
|---|
| End bp | 1316775 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642789232 |
|---|
| Product | NADH/Ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_002219799 |
|---|
| Protein GI | 198283478 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAT CCTCTCTTCT TATGTTGGTT GCACCATGGC CATTGCTATT GGTGGGTTTA
CTTGTAGGAA TCCGCGCGGA CCATCATGCG CGCTGGGTCA AGACGCTGAG CAACGGTGCC
AATTGGTTTG CACTGCTTTG TAGCATCGCT GCTACAACAA TGTATTTGGC GACAATACAG
CATTCGCAGA CCCTACTGTC GATCCATCTT CCATGGGAAC TAGGCTCAAT TGCCGTCCGA
GTATTGATTA ATCCGTTGAC GTTCATCATG TTCGTGTTGG TCTCCTTTAT GGGAATGATT
GTCTCTCGGT ATTCCGCTTC GTATATGGTA GGGGACGCCC ATGAGGGACA GTTCCACCGG
TGGCTGAGTC TGACCGTTGG TGCATTTCTA GTACTGATTG TGACAGATAA TATCTGGGGA
TTCTGGATTT CATTTGTCGC CGCCAGTCTG TTTTTACACC AGTTATTGAT ATTCTACCGC
GAACGTCCGC TCGCCGTGAT TGCGGCACGC AAAAAATATT TGTTTTCGCG TATCGCCGAC
GTGAGCCTTT TCACCGCTTT TCTGCTGATA GCACGGACCA CAGGAAGAGC AGAGTTTTCA
GGAATCGCAC AGTGGATGCA CACGTGGCAC GGAAGTCTTC CTGCCAGCTT GCAGATCGCA
ACAGGCCTGA TTGTACTCTG TGCTATTTTA AAGAGCGGAA TATTTCCATT GCATGGTTGG
CTTATTCAGG TTATGGAGTC CCCCACGCAG GTTTCGGCAC TATTACACGC AGGGCTCATT
TATACCGGGG CATTCCTGCT CTTGCGTGTC AGTCCCATGA TCACCCACGT AAGCTGGGCC
TGGACCGCAC TCATTCTTGC GGGACTTTTA TCTGTAACAG TGGCATCTCT CATGATGATG
ACGGAAACCA ATATCAAAGA ATCACTGGCG TATTCCACTT CTGCGCAGCT AGGTTTCATG
CTCATGGAAT GCGGTTTGGG TTTGTACAGT ATCGCCGTAC TCCATATTAT CGCTCACTCC
GTCTATAAGG CGCATGCGTT CCTGTCTTCC GGAAGTGTGG TAGACAATTT CCGTGGACCG
ACGATCCAGA AGCTCAATAC AAAGCAAACG CTCGGACGAG CGGAATTGGC AATTGTTATA
TCAGGGATAG TGACCTTTGT AGTTGCCATG GCATTTGGCA TCGATTTGCA AAAGCAACCT
ACTTTGCTGA CGATCGGCGC CATCGTCGCC ATTGCGATGG GTCAGCTTCT GCTGCAAGCC
CTCAATAGGT CCGGAGTCGG AGCTGGCACA TTGCTTTCCC GAGTGGCTCT GTTAAGCATC
ATGGTCTGTT CAGCCTATTT TGGGCTGCAT GATCTGTCTA GCGACTTGCT GGGAACCAGC
ATTCCCAGTG ATACCGTGCA GGCTGATCGT ATTCCAATCT GGTTACTGGC GCTTATCGTC
GTGGCTTTTC TTTCCTTGTT GCACATTCAG CAACTTTTGC CCCGTCTGCA GAAGTCGGCT
TTTTTGCAGG CCGTATATGT GAATCTATAT AATGGACTGT ATGTTGATCT TGTTTTTAGT
CAGATGGCCT TTCTGCACGC ATCGAAGATA GGAAAAACGG TGGACGCGGC AAATCCACAA
GTTCGGTTCC CGGAGGAGTA G
|
|---|
| Protein sequence | MITSSLLMLV APWPLLLVGL LVGIRADHHA RWVKTLSNGA NWFALLCSIA ATTMYLATIQ
HSQTLLSIHL PWELGSIAVR VLINPLTFIM FVLVSFMGMI VSRYSASYMV GDAHEGQFHR
WLSLTVGAFL VLIVTDNIWG FWISFVAASL FLHQLLIFYR ERPLAVIAAR KKYLFSRIAD
VSLFTAFLLI ARTTGRAEFS GIAQWMHTWH GSLPASLQIA TGLIVLCAIL KSGIFPLHGW
LIQVMESPTQ VSALLHAGLI YTGAFLLLRV SPMITHVSWA WTALILAGLL SVTVASLMMM
TETNIKESLA YSTSAQLGFM LMECGLGLYS IAVLHIIAHS VYKAHAFLSS GSVVDNFRGP
TIQKLNTKQT LGRAELAIVI SGIVTFVVAM AFGIDLQKQP TLLTIGAIVA IAMGQLLLQA
LNRSGVGAGT LLSRVALLSI MVCSAYFGLH DLSSDLLGTS IPSDTVQADR IPIWLLALIV
VAFLSLLHIQ QLLPRLQKSA FLQAVYVNLY NGLYVDLVFS QMAFLHASKI GKTVDAANPQ
VRFPEE
|
|---|
| |