Gene Lferr_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1354 
Symbol 
ID6877328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1307435 
End bp1308517 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content55% 
IMG OID642789227 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_002219794 
Protein GI198283473 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCC GCTTCGTTCT GCAACGGACG AAGCGGCATA AGGATGAGCA CATCATGATC 
AACTACGATA TCACTATCCA TACCCGTGAT AAGCAACAGG TGTCCTTCGT CTGTTCTGAG
GCGGAAGATT TACTCTCTGC TGCGGACCGG GAAAGTATCC TGCTTCCTTC CCAATGCCGG
AAGGGAACTT GCGGAGCCTG CGTGGCCACC GTTACCGCAG GCACTTATCA CCTGGGTGAA
GTCAGTATGG AAGCCCTGCC AGAGAAAGCG CAGGCACGAG GCGATGTACT TCTGTGCCGT
ACCTATCCGC GAGCGGATCT GATTCTGGAG GCGCCTTATG ACTACAACTA CATCCGCTTT
GAGCGCATCC CGGAGCGCGA GGCAGAAGTA GTGGACGTCA CTATGGTGGC TACGGGTACG
CGACGACTGT TATTACGCCT GCAACCTGAT GAGCAAGGGG GAGCTGCGGA ATTCGAAGCT
GGGCAATTTA TGGAAATCCA GGTACCTGGC AGCGATGCGC GTCGCGCCTA TTCTCTAGCC
AACAACACCA ACTGGAATGG CGACCTGGAA TTTTTCATCA CGCTACGACC AGGTGGTGCC
TTCTCTACCT ATCTGGAATC CGCCTTGGTG GGCGATCGCC TGAACATACG TGGACCACTG
GGAACCTTTA CCCTGAGAGA AAACGGCCTG CGGCCACGTT GGTTCATTGG TGGCGGGACA
GGTCTCGTGC CGCTACTGTC GATGCTGCGA CGCATGGCAG ATTGGGGAGA AATGCTTCCG
GCACGTCTGT ACTTCGGCGC AAGATATGAA GACGAACTCT TCTGTCAGGA GGAAATCCGT
CAGATCCAGG ATAAACTTCC CCAACTGCAG GTGAAGATAT GCCTTTCACG TCCTGGCAAT
CACTGGGTGG ATTATCGAGG CAGCGTGGTG GATGCCTTGC GCGACGATCT GGGAAGTCTT
GCCACTTTAC CGGATCTGTA TGTTTGCGGA TCAACGCGAT TGGTCCAGGG GGTGACGGAA
TTAGCTCTGA GCCAAGGGTT GCCGGACTCC TGTTTGCAGT TCGAACGGTT TTTGTCCGCA
TAG
 
Protein sequence
MERRFVLQRT KRHKDEHIMI NYDITIHTRD KQQVSFVCSE AEDLLSAADR ESILLPSQCR 
KGTCGACVAT VTAGTYHLGE VSMEALPEKA QARGDVLLCR TYPRADLILE APYDYNYIRF
ERIPEREAEV VDVTMVATGT RRLLLRLQPD EQGGAAEFEA GQFMEIQVPG SDARRAYSLA
NNTNWNGDLE FFITLRPGGA FSTYLESALV GDRLNIRGPL GTFTLRENGL RPRWFIGGGT
GLVPLLSMLR RMADWGEMLP ARLYFGARYE DELFCQEEIR QIQDKLPQLQ VKICLSRPGN
HWVDYRGSVV DALRDDLGSL ATLPDLYVCG STRLVQGVTE LALSQGLPDS CLQFERFLSA