Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1349 |
Symbol | |
ID | 6877323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1302212 |
End bp | 1303093 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789222 |
Product | 6-phosphogluconate dehydrogenase NAD-binding |
Protein accession | YP_002219789 |
Protein GI | 198283468 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTAG GTTTCATTGG ATTGGGGCAG ATGGGTTCGG GAATGGCGGC CAGACTGCTA ACTTCCGGAG AGAATATCAA GGTGTTCAAC CGCACTCCCG AAAAAATGCA GGCTCTTGCG GACCAAGGTG CACAAGCCGC CAGCAATCTT CAGGACTTTG CAGATGCCGA TGTGGTATTC ACCATGCTCG CCGATGATCC TGCCGTGACA TCCCTGGTTC TGGAAGAAAA CGGCCTGATA ACGCAGTTGC GGCCGGGGGC CGTGCATGTG TCCTGCAGTA CCATCAGTGT TGCCCTTTCA GCGCAACTGG CCGCAGCCCA TGCCAAAGCC GGACAGGAGT ATCTGGCCGC ACCGGTTTTC GGAAGACCCG ATGCTGCGGC TGCTGGCAAG CTGTTCCTGG TCTTGGCGGG AAAACCGGAA CTCATTACCC GTCTGCAAAC ACTTTTTGAC GTGATAGGTC AACGCAGCTT TGTGGTGGCA GAGGCACCGG AAAAGGCCAA TCTGGTCAAA CTCAGTGGTA ATTTTTTGAT TGCTTCGGTC ATTGAATCGC TGGGTGAGGC CATGGCGCTG GTGGAAAAAG GGGGGGTAGA CCGCCATGCC TATCTGGATC TGCTGACCTC TAGCCTGTTC AATGTGCCCC TCTACAAAAA CTATGGTGCA CTGCTTGCCG ACCGGAAATT TACGCCTCCA GGCTTTGCCG CGCCCTTGGG CCAGAAAGAT ATGCGTCTGG TTCTGGCAGC AGCGGAAAAT CTGGATGTCC CTCTGCCTCT TGCAAGCCTC TTGCGTGATC GCTTTATTCG CCTTGCTGCT GAGGGCGGTG CCACCCGTGA CTGGTCTGCC GTAGGCGCAT TGGCCGCGCA GGATGCCGGT CTTCTGCCCT GA
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Protein sequence | MQVGFIGLGQ MGSGMAARLL TSGENIKVFN RTPEKMQALA DQGAQAASNL QDFADADVVF TMLADDPAVT SLVLEENGLI TQLRPGAVHV SCSTISVALS AQLAAAHAKA GQEYLAAPVF GRPDAAAAGK LFLVLAGKPE LITRLQTLFD VIGQRSFVVA EAPEKANLVK LSGNFLIASV IESLGEAMAL VEKGGVDRHA YLDLLTSSLF NVPLYKNYGA LLADRKFTPP GFAAPLGQKD MRLVLAAAEN LDVPLPLASL LRDRFIRLAA EGGATRDWSA VGALAAQDAG LLP
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