Gene Lferr_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1349 
Symbol 
ID6877323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1302212 
End bp1303093 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content56% 
IMG OID642789222 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_002219789 
Protein GI198283468 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTAG GTTTCATTGG ATTGGGGCAG ATGGGTTCGG GAATGGCGGC CAGACTGCTA 
ACTTCCGGAG AGAATATCAA GGTGTTCAAC CGCACTCCCG AAAAAATGCA GGCTCTTGCG
GACCAAGGTG CACAAGCCGC CAGCAATCTT CAGGACTTTG CAGATGCCGA TGTGGTATTC
ACCATGCTCG CCGATGATCC TGCCGTGACA TCCCTGGTTC TGGAAGAAAA CGGCCTGATA
ACGCAGTTGC GGCCGGGGGC CGTGCATGTG TCCTGCAGTA CCATCAGTGT TGCCCTTTCA
GCGCAACTGG CCGCAGCCCA TGCCAAAGCC GGACAGGAGT ATCTGGCCGC ACCGGTTTTC
GGAAGACCCG ATGCTGCGGC TGCTGGCAAG CTGTTCCTGG TCTTGGCGGG AAAACCGGAA
CTCATTACCC GTCTGCAAAC ACTTTTTGAC GTGATAGGTC AACGCAGCTT TGTGGTGGCA
GAGGCACCGG AAAAGGCCAA TCTGGTCAAA CTCAGTGGTA ATTTTTTGAT TGCTTCGGTC
ATTGAATCGC TGGGTGAGGC CATGGCGCTG GTGGAAAAAG GGGGGGTAGA CCGCCATGCC
TATCTGGATC TGCTGACCTC TAGCCTGTTC AATGTGCCCC TCTACAAAAA CTATGGTGCA
CTGCTTGCCG ACCGGAAATT TACGCCTCCA GGCTTTGCCG CGCCCTTGGG CCAGAAAGAT
ATGCGTCTGG TTCTGGCAGC AGCGGAAAAT CTGGATGTCC CTCTGCCTCT TGCAAGCCTC
TTGCGTGATC GCTTTATTCG CCTTGCTGCT GAGGGCGGTG CCACCCGTGA CTGGTCTGCC
GTAGGCGCAT TGGCCGCGCA GGATGCCGGT CTTCTGCCCT GA
 
Protein sequence
MQVGFIGLGQ MGSGMAARLL TSGENIKVFN RTPEKMQALA DQGAQAASNL QDFADADVVF 
TMLADDPAVT SLVLEENGLI TQLRPGAVHV SCSTISVALS AQLAAAHAKA GQEYLAAPVF
GRPDAAAAGK LFLVLAGKPE LITRLQTLFD VIGQRSFVVA EAPEKANLVK LSGNFLIASV
IESLGEAMAL VEKGGVDRHA YLDLLTSSLF NVPLYKNYGA LLADRKFTPP GFAAPLGQKD
MRLVLAAAEN LDVPLPLASL LRDRFIRLAA EGGATRDWSA VGALAAQDAG LLP