Gene Lferr_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1347 
Symbol 
ID6877321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1300488 
End bp1300934 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID642789221 
Productheat shock protein Hsp20 
Protein accessionYP_002219788 
Protein GI198283467 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.452932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.819182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATG AAGTTTCACG TCCGGTGGTC AAGAGTGTTC GTCAGGTAGA ACCTTTGGAA 
AACTTAATAG AAACAGTGTG GCCTGGAGTA TTTTCTCCTT TCATTACCCG ACAGGCCACG
CAACCCCAAA TCGCGCATAT TGATGTCCTT GATCACGATG ACGCTTTTGT ATTGAAGGCG
GAGATTGCCG GCGTAGATAA GGATAAGCTG GATGTCCAGG TACACGGTAA CCAGGTCTAT
ATCAGTGGCG TCAAGGAAGA AGATAGCTCT CGGGAAGAAG GGAATTATAT CTACCGAGAG
CGTCGATATG GAGAGTTTTC TCGCACCGTG CAGCTCCCTG CAGATGTGAA TGGCGATCAA
ACCAAGGCCA TATACAAAGA TGGTGTTTTA GAGTTGACTC TGCCTAAAAC AGAATCTGCC
AAACGCAAAA AGATTGCGAT TTCCTGA
 
Protein sequence
MANEVSRPVV KSVRQVEPLE NLIETVWPGV FSPFITRQAT QPQIAHIDVL DHDDAFVLKA 
EIAGVDKDKL DVQVHGNQVY ISGVKEEDSS REEGNYIYRE RRYGEFSRTV QLPADVNGDQ
TKAIYKDGVL ELTLPKTESA KRKKIAIS