| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1341 |
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| Symbol | |
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| ID | 6877315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1294217 |
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| End bp | 1294957 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642789215 |
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| Product | P-type conjugative transfer protein TrbJ |
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| Protein accession | YP_002219782 |
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| Protein GI | 198283461 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.8827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.391023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC AAAGCAAGGC AGTCATTCTG AGCGTGAGCC TGGCTCTATT GCCGGCGCCC
GCCTTTGCCG TCAGTGAAGT GGCCGGTGCC ACTTTCCCTG AACAGATTGT CCAGGAAGCG
ACGTCTGTTC AGCAGTTGGC GAAGCAGGCG CAGGAGGTAA CGACACAGAT CAGCATGTAC
GCCAACGATA TCGAGCGCTA TCAGAACATG GTGACCAACA CCCTGAACAT GCCGGCGGCC
ATGTACGCCC AGATCTGGAA TCCGCTGGTG GGATCCATTC AGAAACTGAC CAGCATTTAT
AGCCAGGCAC AGGCGCTGGG CTACGCCGGG CAGAATATCG GCGCTGAACT CGCGCAGGAG
TATCAGGGGG CTGGCAGCTC CATCCAGAAT CTGTCCTCCG TCTATGCCAA CTGGAACCAG
ACGACCAACA CCGACATGGA AGACGCTCTG GAGTCCCAGC ACCTGGCGGC GCAGAACTTC
GCGACACAGG ATGCATCCAT GCAGACGATC CAGAATGAAG CGCAGACAGC TCAAGGCCGG
GAGCAGGTGG CCGCTGCCGC AGTGGCTGCG GCCAACGTCA CCACCAAGTC GATCCAGCAA
CTGGAGCAGA TCACCATGGC TGGACAGGAT GCCGTACTGG CGTATCAGCG GCAGAAGAAG
GCGGAAAAGA ACGTGACTGC GCAGGAGGCA TCAGACGGAC TCTTTTCTGG TGGCACGAAC
AACCCAAGCC TTTTGCCTTG A
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| Protein sequence | MSIQSKAVIL SVSLALLPAP AFAVSEVAGA TFPEQIVQEA TSVQQLAKQA QEVTTQISMY
ANDIERYQNM VTNTLNMPAA MYAQIWNPLV GSIQKLTSIY SQAQALGYAG QNIGAELAQE
YQGAGSSIQN LSSVYANWNQ TTNTDMEDAL ESQHLAAQNF ATQDASMQTI QNEAQTAQGR
EQVAAAAVAA ANVTTKSIQQ LEQITMAGQD AVLAYQRQKK AEKNVTAQEA SDGLFSGGTN
NPSLLP
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