| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1334 |
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| Symbol | |
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| ID | 6877308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1288233 |
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| End bp | 1289201 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642789208 |
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| Product | P-type conjugative transfer ATPase TrbB |
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| Protein accession | YP_002219775 |
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| Protein GI | 198283454 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0908976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATCC ACGCGCACGA TCAGCAGGAA CAGCAGGCCC ATGCCCGCCG GATCGAGCAG
ATGCGGCGCA TTCTGGGGCC GGAGATCGCC GCCCTCTTCG ATGACACTGG CGTCGTCGAG
ATCATGGCCA ACCCCGACGG ACGGGTCTTT GTCGAGCGTC TGGGGTCGGG AATATCCCCC
CTGGGCGAGA TCGATGCGAG CCGTGTCCAG TCGCTGTTAG GGCTCATGGC CGACTACCTG
CATACCACGG TGAGCCGTGA CCGGCCCATC GTCGAGGGGG CCATGCCCAT CGAGTTCCTG
CGCAGCCGCT TTGCCGGCGC GATTCCGCCC ATGGTGGAGG GCGCGTCTTT CAGTATCCGC
CTCCCGGCCC GTTCGGTGTA CACACTCGAT CAGTACGTTG AGGCGGGCAT CATCACGGCG
GCGCAGATGG ACACCCTCTC CGATGCCGTG CTCTCCCGCA AGAATATCCT GGTGAGCGGT
GGCACAGGAT CCGGCAAGAC CACCCTGGCC AACGCCCTCA TCGACCGGAT CTCCAAACTA
TCCGATATCG GCACCCGCAT CGTGATTATC GAAGATACCC GGGAGCTCCA ATGCACCGCT
CCCAATGTGA TCCAGTTCCT GACCGACGAT GATGCGGGCA TCGACATGAC GCGCCTCTTA
AAGCTCACGT TGCGCTATCG GCCCGACCGC ATACTGGTGG GCGAGGTCCG CGACAAGGCG
GCCCTGGCGC TGCTCAAAGC CTGGAATACG GGGCACCCGG GCGGCATCGC CACCCTGCAC
GCCAACAACC CCGAAGCGGC CTTGTTGCGT TTGGACCAGC TCTGCCAGGA AGCGGGTGTT
CCCGCGCAGC AGACGCTGAT CCATGAGGCG GTGGATATCG TTTTGCAGAT TGCCCGTGAC
CCGAATCATC CTGCTGGTCG CAGGATTTCG GCCATCCTCA ATGTGAAAGA CGGCGTGCTG
ATCTCGTGA
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| Protein sequence | MNIHAHDQQE QQAHARRIEQ MRRILGPEIA ALFDDTGVVE IMANPDGRVF VERLGSGISP
LGEIDASRVQ SLLGLMADYL HTTVSRDRPI VEGAMPIEFL RSRFAGAIPP MVEGASFSIR
LPARSVYTLD QYVEAGIITA AQMDTLSDAV LSRKNILVSG GTGSGKTTLA NALIDRISKL
SDIGTRIVII EDTRELQCTA PNVIQFLTDD DAGIDMTRLL KLTLRYRPDR ILVGEVRDKA
ALALLKAWNT GHPGGIATLH ANNPEAALLR LDQLCQEAGV PAQQTLIHEA VDIVLQIARD
PNHPAGRRIS AILNVKDGVL IS
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