Gene Lferr_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1316 
Symbol 
ID6877290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1277404 
End bp1277676 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content64% 
IMG OID642789191 
Producthypothetical protein 
Protein accessionYP_002219758 
Protein GI198283437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0012477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGGCG GACGAAACAC GGAACCCGAA CTCACGAATG ACCGCGCCCG ACGCGAATGG 
CAATGGTTGT GTCGGGAGGT TGGCGAGACG GTGGCGCGGG CCACGATTGC CGCCCTGCCC
GGCAACCGGC GACCCTATCC GCTGAATGTA GCGCGCGCTC TGGGCGTGGC TTTGCCGCCA
GAGGAAAAAT TGCCGCCGCT ATTCGTGCCC GCTGATGAAT CCGTGATGAA TGCCGCCTTG
GCGCAAGCGC GCCAGGTGTT GCACGGACGT TAG
 
Protein sequence
MTGGRNTEPE LTNDRARREW QWLCREVGET VARATIAALP GNRRPYPLNV ARALGVALPP 
EEKLPPLFVP ADESVMNAAL AQARQVLHGR