Gene Lferr_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1311 
Symbol 
ID6877285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1274556 
End bp1275146 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID642789186 
Producthypothetical protein 
Protein accessionYP_002219753 
Protein GI198283432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000318838 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGATTA CAGCCTATGG ACTGGATTTG GCAAAGTCGG TCATGCAGTT GCACTGGGTA 
GATATGGAGA CTGGTGAAAT CCACCGCAAA CAGTTGAAGC GCCGTAGGCT CTTGGAATTC
TTCGCCAACC GCCAACCCGG CGTCGTTGCC ATGGAGGCCT GCGGAAGTGC GCAGGAGAAA
GCGCGAGAGC GGGTGTTGCG GGACACCCTG ATGCTGTTGA TCCGGCAGAA GCGAGACGCG
CAGTTGGAGC AGATCATCGA GAGCGTCTGG CGAGTGCCGG GGTTCTCCGG GATACGGGAT
CAGGTCAAGA AGCTGGCGAA GCTCCTGCAT CAGGAATGGA AGCGCAGCCG GGGCCAGGAA
GAGGCCATGC CCGCGATTCC TGAAAGAATC AGGTATCTGC GGCGCTTGCC CAGTCTGGGG
CGCGCAAGCC CAGGGAACGG GCGGTGCGGA AAGCGAAAGT GGCCACGCAG AAGCGTCGGG
GATGAGCGGT TCACTTGGGC GTATTTTGGG CGAAGTGCCC AAATTCACGC CGCATCGACC
GCTGCAATGC CTGTATTCGC TGGCTTTGTG ATGGTCGGAC CAGAGGATTA G
 
Protein sequence
MEITAYGLDL AKSVMQLHWV DMETGEIHRK QLKRRRLLEF FANRQPGVVA MEACGSAQEK 
ARERVLRDTL MLLIRQKRDA QLEQIIESVW RVPGFSGIRD QVKKLAKLLH QEWKRSRGQE
EAMPAIPERI RYLRRLPSLG RASPGNGRCG KRKWPRRSVG DERFTWAYFG RSAQIHAAST
AAMPVFAGFV MVGPED