Gene Lferr_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1292 
Symbol 
ID6877266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1258332 
End bp1259006 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content55% 
IMG OID642789170 
Producthypothetical protein 
Protein accessionYP_002219737 
Protein GI198283416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00528737 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000240759 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTAATG TTCACCCATT TCCCAAAGAC CGCAGCGGCA AATCTACAAA AGCCAATCGC 
AAGGAACGCG GCCTTGCAGG CGGCTACCCC GCATTTCATC TGCCGGATAT ACATAACGAG
CCTGTGGATG TACTCATGGC GGTTATTCAG GCTGGTGGCC TGTATCTTAC CCCCACGGCG
GAACGCCCTG CCGATGACCT GCCAACGACC CACCTGCTGC GCACTATCGA CGGCCTCAAT
GCGCTGACGG ACGCGGCCAA CGTGCTCATT GATTACGCCA TGCGTCATCC AGCGGAATTT
CCCCAGGAAG ATGTGGACAG TCTGGCCCGG CGAGGCGAAC AGGCCCACAA AGTGATGCAC
AAGCTCGATG AGATGCTGCC GTCGGACGAT TTCATCATGA CCATAGACAG CTACGGTCCT
GACCTGATGG CGGAGTACGC CACCAACGCG GCCATCATTG TTGTCAGTGC CTTTGCCCTG
GATATCATGG CGCACTACGA CGAATCGTTC ATCCAGACCG GCAAGGACAA GCGCAAAGCC
ATGTTCAGAG ATTTTCAGGG GGCCTATCAG GAAGCCCAGG ATGAATGCCT GTCCCGTTCA
GAAGGGCATG AATTTCTGAT CAAAGAATTG ACATCGGCGC AACGTGCCCT AAAAAAGCTA
CTGAAGGAAC CATGA
 
Protein sequence
MTNVHPFPKD RSGKSTKANR KERGLAGGYP AFHLPDIHNE PVDVLMAVIQ AGGLYLTPTA 
ERPADDLPTT HLLRTIDGLN ALTDAANVLI DYAMRHPAEF PQEDVDSLAR RGEQAHKVMH
KLDEMLPSDD FIMTIDSYGP DLMAEYATNA AIIVVSAFAL DIMAHYDESF IQTGKDKRKA
MFRDFQGAYQ EAQDECLSRS EGHEFLIKEL TSAQRALKKL LKEP