Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1292 |
Symbol | |
ID | 6877266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1258332 |
End bp | 1259006 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642789170 |
Product | hypothetical protein |
Protein accession | YP_002219737 |
Protein GI | 198283416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00528737 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000240759 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACTAATG TTCACCCATT TCCCAAAGAC CGCAGCGGCA AATCTACAAA AGCCAATCGC AAGGAACGCG GCCTTGCAGG CGGCTACCCC GCATTTCATC TGCCGGATAT ACATAACGAG CCTGTGGATG TACTCATGGC GGTTATTCAG GCTGGTGGCC TGTATCTTAC CCCCACGGCG GAACGCCCTG CCGATGACCT GCCAACGACC CACCTGCTGC GCACTATCGA CGGCCTCAAT GCGCTGACGG ACGCGGCCAA CGTGCTCATT GATTACGCCA TGCGTCATCC AGCGGAATTT CCCCAGGAAG ATGTGGACAG TCTGGCCCGG CGAGGCGAAC AGGCCCACAA AGTGATGCAC AAGCTCGATG AGATGCTGCC GTCGGACGAT TTCATCATGA CCATAGACAG CTACGGTCCT GACCTGATGG CGGAGTACGC CACCAACGCG GCCATCATTG TTGTCAGTGC CTTTGCCCTG GATATCATGG CGCACTACGA CGAATCGTTC ATCCAGACCG GCAAGGACAA GCGCAAAGCC ATGTTCAGAG ATTTTCAGGG GGCCTATCAG GAAGCCCAGG ATGAATGCCT GTCCCGTTCA GAAGGGCATG AATTTCTGAT CAAAGAATTG ACATCGGCGC AACGTGCCCT AAAAAAGCTA CTGAAGGAAC CATGA
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Protein sequence | MTNVHPFPKD RSGKSTKANR KERGLAGGYP AFHLPDIHNE PVDVLMAVIQ AGGLYLTPTA ERPADDLPTT HLLRTIDGLN ALTDAANVLI DYAMRHPAEF PQEDVDSLAR RGEQAHKVMH KLDEMLPSDD FIMTIDSYGP DLMAEYATNA AIIVVSAFAL DIMAHYDESF IQTGKDKRKA MFRDFQGAYQ EAQDECLSRS EGHEFLIKEL TSAQRALKKL LKEP
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