| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1274 |
|---|
| Symbol | |
|---|
| ID | 6877248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1236172 |
|---|
| End bp | 1236630 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642789152 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002219719 |
|---|
| Protein GI | 198283398 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.222413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.176639 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGACC ACATGGACGA CATCGGCGAT CGCATCAAGG AAATCAGAAA GCGACTGGGA
CTGACTCAGG CAGAACTGGG GAAGCATGCG GGCGGATTGA GTAAATCCGC TGTCCACCAG
TGGGAGAACG GTGGAACGAA GCCGGCATGG GATGCCTTAA CTGCCCTCCG AAAGAATTTG
GGCATCAATC CCGACTGGGT AATGCAGGGA GAGGGTGCGA TGCTCCAGGA GCTAGGGACA
CCTAACGCGG CAACGTTAAT AGAATCTGGC GCGGATGGTT TGCCGTTTGA CGGACGGGGA
CTAACGCCTA TGCAGCGGGC GATGCTGGGG ATCTTCGACC GCCTGACGTC CAGTCAACAG
GATGAAGTCA TGCGAGAGCT TGAAGAAACT AAACGGAAAA ATGAAGAAAT AATTGAGGAG
CTTACCAGAC GAAAAACCAA CCATGCAAAT GAGTCTTGA
|
|---|
| Protein sequence | MLDHMDDIGD RIKEIRKRLG LTQAELGKHA GGLSKSAVHQ WENGGTKPAW DALTALRKNL
GINPDWVMQG EGAMLQELGT PNAATLIESG ADGLPFDGRG LTPMQRAMLG IFDRLTSSQQ
DEVMRELEET KRKNEEIIEE LTRRKTNHAN ES
|
|---|
| |