| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1271 |
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| Symbol | |
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| ID | 6877245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1234079 |
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| End bp | 1235074 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789149 |
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| Product | integrase family protein |
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| Protein accession | YP_002219716 |
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| Protein GI | 198283395 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.828065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.193617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCATCT GGATCGACAA CAAAGATCGT CGAAATGTCC AAGTTCAAGT TGACGGCAGA
CGCCTACATC GCATCCTGCC AGCCGGGTCG TCTGCGCGTG ACGCCAAGCA AGTCGAAGCC
AGACTTCGAG CCGAACTGAC ATCGGCAAGC CCCCTGCCGG AGCGTGCCGG CGACCCACCG
CTTGCCGCTG TCATGCCCTT GTACCTCAAG CATCTGGAGC ACCTGCGTAG CCCGGAGACC
GCCCGATTCC ATGCTGCCCG CATCACCCCC TGGCTCGCCC AATACACCGC CTCAGAGGCC
CCAAAATGCG CCGCGATGAT TATCCGCGAC ATGACCGGAG CCTATGCGCC CGCGACGATC
AACCGCAGTC TGGGCGCGCT CAAGAAGGCC CTCACGCTGG CCTGGGAACA GGAACTGACC
CCAGAGAACT ACGGTGCCAG GATCAAGCGC CTGCCGGAGC ACAACGAGCG GCATATCTAC
CTAACGCTGG AGCAGGTCAA CGAACTCGCC AGCCACGCAT CCGATCCGGT CGCTGCCGCG
ATTTGGATTG CTCTATTTAC CGGCTGCCGT CGCGGCGAAA TCACGAAGCT CAAGGCCGAG
GACGTAGGGG AAACGACGAT CACCATCCGC GCTGGGAACA CTAAAACGCT TAAAACGCGT
ACCGTACCCA TCATCGGACC GATGCGCCTC TGGCTACCAT TCATCCCTCT CCCCATCAAC
GCCGAAGGGC TTAAGTCTGG ATTTCGTCGC GCCCGCGAGA AGGCCGGATT GCCACACTTG
CACTTTCACG ATCTACGGCA CTCTTGCGCA TCAATTTTGC TAGCATCAGG AGCAGACCTG
TACACCATCA GCCGTATCCT AGGTCACTCA TCCACCAAGA TGACAGAACG TTACGCGCAC
CTGCAAACCG ACGCGCAATC CATCGCCTTG GAACGTGCTT TTTCAGAAAA TGCACTCAAC
AATGCACTCA ACAAAAAACC GGCCCTGGGC AGGTGA
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| Protein sequence | MSIWIDNKDR RNVQVQVDGR RLHRILPAGS SARDAKQVEA RLRAELTSAS PLPERAGDPP
LAAVMPLYLK HLEHLRSPET ARFHAARITP WLAQYTASEA PKCAAMIIRD MTGAYAPATI
NRSLGALKKA LTLAWEQELT PENYGARIKR LPEHNERHIY LTLEQVNELA SHASDPVAAA
IWIALFTGCR RGEITKLKAE DVGETTITIR AGNTKTLKTR TVPIIGPMRL WLPFIPLPIN
AEGLKSGFRR AREKAGLPHL HFHDLRHSCA SILLASGADL YTISRILGHS STKMTERYAH
LQTDAQSIAL ERAFSENALN NALNKKPALG R
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