Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1271 |
Symbol | |
ID | 6877245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1234079 |
End bp | 1235074 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642789149 |
Product | integrase family protein |
Protein accession | YP_002219716 |
Protein GI | 198283395 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.828065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.193617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCATCT GGATCGACAA CAAAGATCGT CGAAATGTCC AAGTTCAAGT TGACGGCAGA CGCCTACATC GCATCCTGCC AGCCGGGTCG TCTGCGCGTG ACGCCAAGCA AGTCGAAGCC AGACTTCGAG CCGAACTGAC ATCGGCAAGC CCCCTGCCGG AGCGTGCCGG CGACCCACCG CTTGCCGCTG TCATGCCCTT GTACCTCAAG CATCTGGAGC ACCTGCGTAG CCCGGAGACC GCCCGATTCC ATGCTGCCCG CATCACCCCC TGGCTCGCCC AATACACCGC CTCAGAGGCC CCAAAATGCG CCGCGATGAT TATCCGCGAC ATGACCGGAG CCTATGCGCC CGCGACGATC AACCGCAGTC TGGGCGCGCT CAAGAAGGCC CTCACGCTGG CCTGGGAACA GGAACTGACC CCAGAGAACT ACGGTGCCAG GATCAAGCGC CTGCCGGAGC ACAACGAGCG GCATATCTAC CTAACGCTGG AGCAGGTCAA CGAACTCGCC AGCCACGCAT CCGATCCGGT CGCTGCCGCG ATTTGGATTG CTCTATTTAC CGGCTGCCGT CGCGGCGAAA TCACGAAGCT CAAGGCCGAG GACGTAGGGG AAACGACGAT CACCATCCGC GCTGGGAACA CTAAAACGCT TAAAACGCGT ACCGTACCCA TCATCGGACC GATGCGCCTC TGGCTACCAT TCATCCCTCT CCCCATCAAC GCCGAAGGGC TTAAGTCTGG ATTTCGTCGC GCCCGCGAGA AGGCCGGATT GCCACACTTG CACTTTCACG ATCTACGGCA CTCTTGCGCA TCAATTTTGC TAGCATCAGG AGCAGACCTG TACACCATCA GCCGTATCCT AGGTCACTCA TCCACCAAGA TGACAGAACG TTACGCGCAC CTGCAAACCG ACGCGCAATC CATCGCCTTG GAACGTGCTT TTTCAGAAAA TGCACTCAAC AATGCACTCA ACAAAAAACC GGCCCTGGGC AGGTGA
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Protein sequence | MSIWIDNKDR RNVQVQVDGR RLHRILPAGS SARDAKQVEA RLRAELTSAS PLPERAGDPP LAAVMPLYLK HLEHLRSPET ARFHAARITP WLAQYTASEA PKCAAMIIRD MTGAYAPATI NRSLGALKKA LTLAWEQELT PENYGARIKR LPEHNERHIY LTLEQVNELA SHASDPVAAA IWIALFTGCR RGEITKLKAE DVGETTITIR AGNTKTLKTR TVPIIGPMRL WLPFIPLPIN AEGLKSGFRR AREKAGLPHL HFHDLRHSCA SILLASGADL YTISRILGHS STKMTERYAH LQTDAQSIAL ERAFSENALN NALNKKPALG R
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