Gene Lferr_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1270 
Symbol 
ID6877243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1233172 
End bp1233825 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID642789147 
Productprotein of unknown function DUF202 
Protein accessionYP_002219715 
Protein GI198283394 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.608137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.262107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTTC TGAAATACTT GCCGACGGTA CAGGAACCCC GGCTGTACAT GGCCTTGGAA 
CGAACCTACC TGGGTTATTT CAAGCTCCTC TTCCTGTCGA TAGGCACCGG CCTGCTTTCC
GCACGCCTGG CCATTCTCTT CAAGGCACTC CACTACGCTA CCCTGGGCCA CTTTTTTACC
GAGCTTTTCT ACTGGCTGAG CTGGCCCGCC ATCGCCCTGG TTTTTGTGGT AGGATTTCGT
TTTATGTCGG ACCTGGAATA TATCGAAAAA GGATCTCCCG TGGCTGCGAA AGAAATCATT
GATCCGCGCA TTTACATGGC CGCCGAGCGT ACCTTCCTCG CCTGGGTACG CACCGGCATC
GGCCTGATTG CCTTCGGTTT CGTGATCGAA AAATTCGATT TTTTCCTGGA GCAACTCTCC
ATCATGCTCC ATACCAAACT CGTGATGGGC GCGGGCTTTT CCGGGATGGG CATCGTTTTC
ATTCTTCTCG GGGTCACCAA TCTGGTCATC GGTGGCATCA ACTTCATTCG TACGGTCAAA
AAAGTGGACG AGGGCACTTA TCATGTCCAC AAATTTCTCT ACGGCCTCTA TGGAGTCATT
CTGCTGAGTA TCACCATCGT GCTGGCTGCC ATGATCATCC ATGTGTCGCC CTGA
 
Protein sequence
MMFLKYLPTV QEPRLYMALE RTYLGYFKLL FLSIGTGLLS ARLAILFKAL HYATLGHFFT 
ELFYWLSWPA IALVFVVGFR FMSDLEYIEK GSPVAAKEII DPRIYMAAER TFLAWVRTGI
GLIAFGFVIE KFDFFLEQLS IMLHTKLVMG AGFSGMGIVF ILLGVTNLVI GGINFIRTVK
KVDEGTYHVH KFLYGLYGVI LLSITIVLAA MIIHVSP