Gene Lferr_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1262 
Symbol 
ID6877235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1222742 
End bp1224169 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content62% 
IMG OID642789139 
ProductAldehyde Dehydrogenase 
Protein accessionYP_002219707 
Protein GI198283386 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01780] succinate-semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCG CACCGACAGC CGCATTTATC GATGGATGCT GGACAGACCT CAGGGCGCGC 
TTTGTGGTAC AAAGCCCGGT CAATCAACAG ATGCTCGCCG AAGTGTCCGA TTGCGGACCT
CGGGAGGCTG ACGCAGCAGT GCAGGCGGCG ACGGTCGCTT TTGCAGCCTG GCGTCAAACT
ACCGTCTACC AGCGCGCGCT CATCCTCAGC CGTTGGGCGG ATCTCATCCA GGTTCACGCA
GAAGACCTCG CACGTCTCAT CACCTGGGAG ATGGGCAAAC CCATACGCCA GAGTCGTGCG
GAGATCAAAA CCGCAGTCGC CCTGGCGCGC TGGTACGCCG AAGAATGCAA GCGCGTCACC
GGCGAAAGTA TCCCCTCCCA GTTTCCGGAC AAGCGCTTAC AGATCTGGAA AGTGCCGATT
GGCCCGGTAT TCGCCATTAC GCCGTGGAAC AGTCCGGTCT CCATGGTCGT TCGCAAGATA
GCGCCGGCTC TGGCTGCCGG CTGTACGGTC ATCCTCAAGC CCGATGAGCA AACGCCCCTC
TCCGCATTAA AACTTGCCGA ACTCTGGGCC GCGGCGGAAG GACCCGCCGG CACTCTGCAG
GTGCTCCCCA GCGCTGATCC TGCACCCCTG GCGGAACGGC TGATGGCGGA CTCGCGCATA
GCCAAGTTGA GCTTTACCGG CTCCACGGCG GTCGGGCAGA AGCTTTATGC GCAGGGATCG
CCGACCATCA AACGGCTTTC TCTGGAGTTG GGAGGGCATG CACCGGTGCT TATTTTTGCC
GATGCGGACA TCGACGCAGC GGTGGCCATG ACCATCCATG CCAAATTCCG CTATGCCGGC
CAGTCCTGTG TCGCCGCCAA CCGCCTCTAT GTGGATGAGG CGATCCTGCC GGAGTTTACG
GCGCGCTACC TTGAAGCTAT GGGTCACCTC AAGGTCGGAG ACCCTTTTGC CGAGGATACC
GACATCGGAC CGCTGGTTTC CGAAGTCGCT GTCCAGAAGT TCAAAGCGCA GTTGCAGGAT
GCCATGGCCC GGGGTGCAAG ACTTCTGTGC GGAGGGGATG CACAAGGCCT GTGGTGCTCC
CCGACCCTCC TCGCCGACCT CGATCCGCAG AGCCGCATAT TCCACGAGGA AAGCTTCAGC
CCCCTGCTGC CCATACAGGG GTTTCGTAGC GAAGCGGAAG CTGTCGCCCG CGCCAATGAC
ACCCCCTATG GCTTGGCCGC TTACCTATGG ACCCGCGATC TCGGGCGCGC ATACCGCATC
GCGGAGGCGC TGCAATGCGG CATCGTCGGC GTCAATGACG GGGCTCCCGC CACCCCACAG
GCGCCTTTCG GCGGCAGCAA GCTCTCCGGA CTGGGCGCCG AGGGTGGCAA ATGGGGGTTG
GAGGAATATT TGCAACTGCG TTATGTCTCC TTCCAATTGC CGGGGTAA
 
Protein sequence
MPLAPTAAFI DGCWTDLRAR FVVQSPVNQQ MLAEVSDCGP READAAVQAA TVAFAAWRQT 
TVYQRALILS RWADLIQVHA EDLARLITWE MGKPIRQSRA EIKTAVALAR WYAEECKRVT
GESIPSQFPD KRLQIWKVPI GPVFAITPWN SPVSMVVRKI APALAAGCTV ILKPDEQTPL
SALKLAELWA AAEGPAGTLQ VLPSADPAPL AERLMADSRI AKLSFTGSTA VGQKLYAQGS
PTIKRLSLEL GGHAPVLIFA DADIDAAVAM TIHAKFRYAG QSCVAANRLY VDEAILPEFT
ARYLEAMGHL KVGDPFAEDT DIGPLVSEVA VQKFKAQLQD AMARGARLLC GGDAQGLWCS
PTLLADLDPQ SRIFHEESFS PLLPIQGFRS EAEAVARAND TPYGLAAYLW TRDLGRAYRI
AEALQCGIVG VNDGAPATPQ APFGGSKLSG LGAEGGKWGL EEYLQLRYVS FQLPG