Gene Lferr_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1250 
Symbol 
ID6877223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1215869 
End bp1216660 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content58% 
IMG OID642789127 
ProductLRV FeS4 cluster domain protein 
Protein accessionYP_002219695 
Protein GI198283374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC CGAATGAGGC CGTTGACTGG CAGGGCTGCG CAGTCTCCTG TAAGACTTGT 
CCCGAGCGCG AGATCCCGGG GCTGAAGTGT AAACTTTTGC ATGCCTGTAT GCACGATCGT
TACGCCAAAA GAGTGGATCG CTTTTTTCGC TGGAATCCAC AGATCGCCAA GGATTATCTG
CAACACGGCT ACTTTGAAGT GCGGGCTTGC GCCGCGCGTT ATGCGGATAT TTTTCATCTG
CCGGCGCTCA TGAACGATCC GGATGAAACC GTGCGCTGGG CAGTAGCGCA GCGGCTTCCG
CAACGCTATC TGCTGCGCAT GATCCACGAT CCGCATCGGG AAGTGCGTAT CCGGGTAGCG
GCGCGGCTGG ATGAACGTAA TCTGTCTGCC ATGATGCACG ATGCGGATTA TTACGTGCGT
CTGGAGGTGG TGCGTCGCCT GCCCAAAGGT CTATTGGCGC TCATGATGCA TGATTCCGAC
GTGGAGGTTC GGCGCGTTGT GGCCAAACGT ATCGGCGTGG ATGCTCTGGT CAAAATGCTG
CGGGACGATG ATCCCGGGGT CCGTCTCGAT GCCATTGAAC GTGTACCGGT GTCGACCCTT
TCCACACTAG TTGACGATGC GGATTGGCGT ATCCGCTACG AGGTGGCGGC GCGCGGGAGC
CAGGAAGCGG TAATCAGCCT GTTGGCGGAT GAGGATTATG AGGTGCGTCG TTGCGCCGCG
GAACGCTTAG GGAAAGGCGA ACCACTTTCC AGACAACGAT TGCCAGGGGA GGGTGGGATA
TGGCCGGAAT GA
 
Protein sequence
MSDPNEAVDW QGCAVSCKTC PEREIPGLKC KLLHACMHDR YAKRVDRFFR WNPQIAKDYL 
QHGYFEVRAC AARYADIFHL PALMNDPDET VRWAVAQRLP QRYLLRMIHD PHREVRIRVA
ARLDERNLSA MMHDADYYVR LEVVRRLPKG LLALMMHDSD VEVRRVVAKR IGVDALVKML
RDDDPGVRLD AIERVPVSTL STLVDDADWR IRYEVAARGS QEAVISLLAD EDYEVRRCAA
ERLGKGEPLS RQRLPGEGGI WPE