Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1239 |
Symbol | |
ID | 6877212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1205411 |
End bp | 1206886 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642789116 |
Product | nitrogenase molybdenum-iron protein alpha chain |
Protein accession | YP_002219684 |
Protein GI | 198283363 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain [TIGR01862] nitrogenase component I, alpha chain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0291496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATTA CCGCTGAAGA AACCCGGGAG CAGATTGTCG CCGAGACCAA GACGCGCAAT CGTGCCCTGA TTGATGAAGT TCTCAAGGTC TATCCGGAAA AAACCGCCAA GAGACGCGCC AAACACCTGA ACGTCTTCGA GGACGGTAAA TCGGATTGCG GCGTCAAATC CAATATCAAG TCGGTGCCCG GCGTGATGAC CATTCGTGGT TGTGCCTATG CGGGTTCAAA GGGCGTCGTC TGGGGTCCGA TCAAGGACAT GATTCACATT TCCCATGGAC CCGTCGGTTG CGGCCAGTAT TCCTGGGGCT CGCGACGCAA CTATTATATT GGCACAACGG GTGTGGATAC CTTTGTCACG ATGCAGTTCA CTTCCGATTT TCAGGAAAAA GATATCGTTT TCGGCGGTGA CAAGAAGCTC GAAAAAATCA TGGATGAAAT CGAGGACCTC TTCCCGCTGA ACCACGGTAT TACCGTGCAA TCGGAATGCC CCATCGGCCT GATCGGAGAC GATATCGAAG CGGTGTCCAA AAAGAAGTCC AAGGAATTTG GTGGAAAAAC CATTGTTCCG GTGCGTTGTG AGGGCTTCCG GGGGGTATCC CAATCGCTCG GCCACCATAT CGCCAACGAC AGCGTCCGCG ACTATGTCTT CGAGAAACAA GGCGCGGAAC CCAAGGCCTT TGAAAAGACC CCTTACGATG TCGCCATTAT TGGTGACTAT AACATCGGCG GCGATGCCTG GAGTTCACGC ATCCTGCTGG AAGAAATGGG TTTGCGGGTG ATTGCCCAAT GGTCCGGCGA TGGTTCTCTG GCGGAATTGG AGAACACCCC CATGGCCAAA TTGAATGTCC TGCACTGCTA TCGTTCCATG AACTATATCT CCCGCTACAT GGAAGAAAAG CATGGCGTGC CGTGGGTCGA GTATAACTTC TTCGGACCTT CCAAAATTGC CGAGTCTTTG CGGACGATTG CCAGTTATTT TGATGATCAC ATCAAGGAAG GCGCGGAACG GGTTATCGAG AAGTACAACC GCCTCACCGC AGAAGTGATC GCCAAATACC GGCCGCGCCT GGAAGGCAGA ACGGTCATGC TTTTTGTCGG GGGATTGCGT CCTCGCCATG TCATCGGTGC CTATGAAGAT CTCGGCATGA ATGTAGTGGG AACCGGCTAT GAATTCGGCC ACAACGACGA CTATCAGCGT ACTACCCACG ATGTGAAAGA CGGTACGCTG ATTTATGACG ATGTGACCGG CTACGAGTTT GAAAAGATGG TGGAAACCAT CCAGCCCGAT CTCGTGGGTT CCGGCATCAA GGAAAAGTAT GTCTTCCAGA AGATGGGCGT GCCCTTCCGC CAGATGCACT CCTGGGACTA TTCCGGTCCT TATCACGGCT ATGACGGCTT CGCCATCTTC GCCCGGGATA TGGATATGGC CATCAACAAC CCGGTGTGGA GTTTGACCAA GACGCCCTGG GAGTAA
|
Protein sequence | MSITAEETRE QIVAETKTRN RALIDEVLKV YPEKTAKRRA KHLNVFEDGK SDCGVKSNIK SVPGVMTIRG CAYAGSKGVV WGPIKDMIHI SHGPVGCGQY SWGSRRNYYI GTTGVDTFVT MQFTSDFQEK DIVFGGDKKL EKIMDEIEDL FPLNHGITVQ SECPIGLIGD DIEAVSKKKS KEFGGKTIVP VRCEGFRGVS QSLGHHIAND SVRDYVFEKQ GAEPKAFEKT PYDVAIIGDY NIGGDAWSSR ILLEEMGLRV IAQWSGDGSL AELENTPMAK LNVLHCYRSM NYISRYMEEK HGVPWVEYNF FGPSKIAESL RTIASYFDDH IKEGAERVIE KYNRLTAEVI AKYRPRLEGR TVMLFVGGLR PRHVIGAYED LGMNVVGTGY EFGHNDDYQR TTHDVKDGTL IYDDVTGYEF EKMVETIQPD LVGSGIKEKY VFQKMGVPFR QMHSWDYSGP YHGYDGFAIF ARDMDMAINN PVWSLTKTPW E
|
| |