Gene Lferr_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1236 
Symbol 
ID6877209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1202998 
End bp1203342 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content56% 
IMG OID642789113 
Productferredoxin 
Protein accessionYP_002219681 
Protein GI198283360 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0203128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGG TGCAATTTAT TTCACCGCGT ATCGGGGGTG ACTGGTCAAT GTCCTGTCGC 
AACCATCAGT CCATATCTCT CCTGAAGATG GCCCGCATGT GGAATGTACC CCTGCCCGTC
CAGTGCCGGA AAGGTCTTTG CGGAACTTGC GCGGTACGGG TGACCCCACA GGGAAAGCAA
CAGCAGTTGT GTCTGAGTGC TTTTGAAAGG CAAACGTTGC GGTGCCTCGG CAAGCTCCCC
GCCGTGCTGG ACAGTGAAGG CCAGAAGCCG TGGAAAGGAC CCTATTGGCG ACTGGCCTGC
CAGTGCATAG TGGGGACTGG TGATCAATTC TTTGTCGCAT TCTGA
 
Protein sequence
MGLVQFISPR IGGDWSMSCR NHQSISLLKM ARMWNVPLPV QCRKGLCGTC AVRVTPQGKQ 
QQLCLSAFER QTLRCLGKLP AVLDSEGQKP WKGPYWRLAC QCIVGTGDQF FVAF