Gene Lferr_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1232 
Symbol 
ID6877205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1199301 
End bp1199768 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content54% 
IMG OID642789109 
Productnitrogen fixation protein 
Protein accessionYP_002219677 
Protein GI198283356 
COG category 
COG ID 
TIGRFAM ID[TIGR02935] probable nitrogen fixation protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000318988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGAGA ATACTGCAAT GGCGGCGCTT TTGCCGGAAG AGTCCCTGTT TTTTCGCGAA 
CTGGTCAAGC AGTGGCGGGC ACAGGATAGC TATGGTACCT GGGAAAAAAA GTCCGACATG
GAGCTGCTGG CACCCTACGT GCTGGATAAG GAGCAGCGCC GGGCAATACC CATCATTGGT
GACCCCGATC CCGAAATACT TTGGCGGGTG GAACTTTTTT ATAACGCCGT GGGGCTGGCT
ACGGAGCGTG CTTCCGGAGT CATGGTGTCC CCCATGATGA AAATGAGTCA TGAAGGCTTT
GGCCGCATGG TGCTGATTGC CGGACGTTTG ATCGTGGTCA ACAAACAGTT GCGCGATGTG
CATCGTTTTG GTTTCCCCAG CATGGAAAAA CTGGCCGAAG AAGGTGACAA ACTGGTGGCA
GGTGCCCTGG AAATGATCGA GAAATTTCCG GAGGTGGCCC GCTTTTGA
 
Protein sequence
MPENTAMAAL LPEESLFFRE LVKQWRAQDS YGTWEKKSDM ELLAPYVLDK EQRRAIPIIG 
DPDPEILWRV ELFYNAVGLA TERASGVMVS PMMKMSHEGF GRMVLIAGRL IVVNKQLRDV
HRFGFPSMEK LAEEGDKLVA GALEMIEKFP EVARF