Gene Lferr_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1197 
Symbol 
ID6877170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1167364 
End bp1167975 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID642789074 
Productglobin 
Protein accessionYP_002219642 
Protein GI198283321 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00270568 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATGG AACAGGAAAG ATCAGCCGTC CTGAAGTTGT CCGTTCACAA TGATGCTGTC 
CTCTCGGAAC AGGGTCCGCA CTGCCCCGGC TCGGAGACGC TGGATATCCG TCATTTTGGG
GAGGAGGAAT CCATAGTGCG CCCCGCCGTT ACCGATATGC GGTTTCCCGA AGTGATTTTT
CCCACCAGCC GGGTAGCGCG GGTAGCCGGG GTGGAAAAAG TCCGGGAACT GGTCGTGGAG
CATCACCGGC TCATCTGGCA CAGTCCGCTC CAGCCCATCT TTGGCAGCAA TGAAAAGCAC
TTCTGGAAGG CCGTGGAATT GACGGCGGAT TTTCACGCAG AGGTCTGCGG TGGGCCGAAG
TTATATACGG AACGCAAAGG TCATCCCCAT CTGCGCGAAC GGCACTTTCC TTTCACCATC
CGAGAGAAGG ACCGTGAACT CTGGCTGGAT CTCTACATAC AGGCCCTGCG CAATGTCGCA
TTCCCGCTGG AGGTGGCGGA GGAATACTGG CGCTGGGTGG AATCTCTGTC CATCCGCATG
ATCAACCGCC GCACCACCTT CGCGGAACCG GTGCGGGTGC CCTTCAGCCG TATCGCCGAA
CAGTTGGCCT GA
 
Protein sequence
MNMEQERSAV LKLSVHNDAV LSEQGPHCPG SETLDIRHFG EEESIVRPAV TDMRFPEVIF 
PTSRVARVAG VEKVRELVVE HHRLIWHSPL QPIFGSNEKH FWKAVELTAD FHAEVCGGPK
LYTERKGHPH LRERHFPFTI REKDRELWLD LYIQALRNVA FPLEVAEEYW RWVESLSIRM
INRRTTFAEP VRVPFSRIAE QLA