Gene Lferr_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1194 
Symbol 
ID6877167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1163588 
End bp1164886 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content57% 
IMG OID642789071 
ProductElectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_002219639 
Protein GI198283318 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0537689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA AATTTGATGC CATTGTGGTA GGTGCCGGCC CCGCCGGTAA TGCAGCCGCG 
TATACCATGG CCAAGGCGGG TCTGAGCGTA TTGCAACTGG AACGCGGTGA AACTCCCGGC
ACCAAAAACG TCCAGGGGGC CATTCTCTAC GCCGACGCGC TGGAACGCAT CATTCCCGAT
TTCCGCGACG ATGCCCCGTT GGAACGCCAT ATCATCGAAC AGCGCATGTG GGTGCTGGAT
GAAAAATCCT TCATCGGCAC CAACTATCGC TCGGATGCCT TCAACAGCGA CCAGCCCAAT
CGTTATACCA TCCTCCGGGC GCCTTTCGAC AAGTGGTTCT CCGGAAAGGT CAAGGAGGCT
GGGGCATTGG TCATCTGCGA GACGACGGTC ACCGAGCTCA TCCAGGAAGG CAAAAAGGTC
ATCGGCGTCC GTACCGACCG TGAGGGAGGC GACATTTATG CCGATGTGGT GATCCTGGCG
GATGGCGTCA ATTCGCTGTT GGCCAAAAAA GCCGGGTTCC ATGGCGAACT CGAAGCCAAA
AACGTCGCGC TTGCGGTCAA GGAAATTCAC TTTCTGCCCG AGGAGATCGT CCAGAGCCGT
TTCAACATCA AGGGCAACGA AGGGGTGGTC ATTGAGATCG CCGGTGCCGT CACCCACGGC
ATGGTCGGCA CCGCCTTCCT CTATACCAAC AAGGAATCCA TCACGCTGGG TATCGGTTGC
CTCTTGTCCG ACTTCAAAAA TGCAGGCATC GCGCCCTATA CCCTCCTCGA AAAACTCAAG
GCGCATCCGG CCATTGCCCC GTTGATCGAG GGGGGAGAAA TGAAGGAATA TGCCGCCCAC
CTGATTCCCG AAGGGGGCTA CAAGGCCGTT CCGACCCTCT ACGGCGAGGG CTGGATGATT
GCGGGGGACA GCGCCGGACT GGTAAATGCG GTCCACCGTG AAGGCTCCAA CCTGGCGATG
ACCAGTGGCC GACTGGCCGC AGAAACGGTT ATCGCGCTGA AAGAGATGAA GCTCCCCTGT
ACGGCCCCCC ATCTTGCCCG TTACAAAACC GCGCTGGACG ACAGTTTCGT CATGAAAGAT
TTGCGCAAGT ACAAGGAGTT GCCTGATATC CTACACGGCA ATCCGCATTT CTTTTCGGTA
TATCCGCAAC TCCTCAACCG CGCCGCGCAT ACCATGCTGA TGGTCGATGG TCAGGATAAG
CACAGCAAGG AAAAGACCAT TCGGGGCAGC TTTGTACAGC AACGCTCGTT ATGGGGTTTG
GTGGGAGACG CTTACCGCAT GTGGAGGGCA ACACGATGA
 
Protein sequence
MAEKFDAIVV GAGPAGNAAA YTMAKAGLSV LQLERGETPG TKNVQGAILY ADALERIIPD 
FRDDAPLERH IIEQRMWVLD EKSFIGTNYR SDAFNSDQPN RYTILRAPFD KWFSGKVKEA
GALVICETTV TELIQEGKKV IGVRTDREGG DIYADVVILA DGVNSLLAKK AGFHGELEAK
NVALAVKEIH FLPEEIVQSR FNIKGNEGVV IEIAGAVTHG MVGTAFLYTN KESITLGIGC
LLSDFKNAGI APYTLLEKLK AHPAIAPLIE GGEMKEYAAH LIPEGGYKAV PTLYGEGWMI
AGDSAGLVNA VHREGSNLAM TSGRLAAETV IALKEMKLPC TAPHLARYKT ALDDSFVMKD
LRKYKELPDI LHGNPHFFSV YPQLLNRAAH TMLMVDGQDK HSKEKTIRGS FVQQRSLWGL
VGDAYRMWRA TR