| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1186 |
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| Symbol | |
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| ID | 6877159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1158508 |
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| End bp | 1160421 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789063 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002219631 |
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| Protein GI | 198283310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.470045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATGGT CGGTCGCGGA TAGTCGCCAT CTGTATAACC TGCCGCATTG GGGTGAGGGG
TACTTCGATG TGGGGGCGGA CGGGCAGATC ATCGTCCGTC CCGATGCCAA TCCTCAGGGT
GCCGCCGTTG GGCTGGCCGA TGTCGCGGCA GTATTGGGTG AACATTCCCT CGGTTTGCCC
TGCCTCCTGC GTTTCCCGCA GATCCTCGGG GATCGTGTGG CGCGCCTGCA CGGCGCCTTT
GGTGATGCCA TCCGCGCCCT CGATTACAAG GGCAGCTTCA CTCCCGTTTA TCCGATCAAG
GTCAATCAGC AGCGGCGCGT CGTGGAGGAG ATTTTGCGGG CCGGTGCGGG AAGTGTCGGC
CTGGAGGCGG GTAGCAAACC GGAGCTGCTC GCGGTCATCG GACTGATGCC GGTGGGTGGA
ACCATTATCT GCAATGGATA CAAGGATAAG GAGTATATTC GCCTGGCCCT GACGGGTGAG
AAACTGGGCA TGCAGGTCTA CCTAGTGGTG GAAAAGCCAT CGGAGCTGCC CCTGATCCTG
AATGAGGCCA GCAGGCTCGG CGTCAAACCC CGGATTGGAG TGCGCGCGCG CTTGGCATCC
GCCGGTTCCG GCAAGTGGCA GAATACCGGT GGCGAAAAGT CCAAATTCGG CCTGTCTACG
GCGGACATCC TGGAACTCGT CCACCGCCTG CGCGCAGAAA ACGCGCTGGA TAGCCTGCAA
TTACTGCACT TCCATCTCGG CTCCCAGATT CCCAACATTC AGTTCATCAG GGGCGGCATG
CGTGAATGTG CCCGCCTCTA TGCCGAACTG CGGCGCCTGG GCGCGGCCCT GGAGGTGGTG
GATGTGGGCG GTGGGCTCGG CGTGGACTAC GAAGGCACAC ATTCCCGCGC GTATTGCTCC
ACGAACTATC ATGTCTCGGA CTATGCCCAT GCCATCGTCG CCACACTGGC TGATGTATCA
CGCCAGGAGG GCCTGCCGGA GCCGCGTATC ATCTCTGAAT CGGGGCGGGC GCTAACGGCT
CATCACGCCA TCTTGGTGGC TAATGTCAGC GATGTGGAGA TGGCGGCCGG AGAACATCCG
CCGTCAACAC CTTCCGCCGA CCTGATGGAT GGTGAATGGG GCCGTCTGCT CACTCGCCTG
GATCAGGGTA ACGCCGCTGC CGCGCTGGAA GTCTACCAGG AGGCACTCTA TCTGCTGGCA
GAGGTTCACC AGCAATTCAA CCTCGGTATC ATTCACATCG AGGGGCGGGC CGAGGCCGAA
GGCATTTATG CCCAACTACT CTGGCGGGTG CGCGGCTTCC TTGACCCGCA TAATCGCGCG
CACCGTGACA TCCTCGACGA ACTCGACGAA AAGCTGGTAG ACAAATATTT CGTTAACTTT
TCCCTGTTTC AGTCGCTGCC CGATGTCTGG GCCATTGATC AGATTTTTCC GATAGTGCCC
ATACAGCGGC TGAATGAAGA GCCGACCCGG CGGGCTCGCC TCGAAGACAT CACTTGCGAT
TCCGACGGCA GAATCGACGC GTACGTCACG GCGGAAGGCT TGACGCCGGC GCTGCCGGTA
CATGCGCTAC AGGAGGGAAG GCCTTATCTC CTCGGTATTT TTCTGGTGGG TGCTTATCAG
GAAATTCTCG GGGATATGCA TAATCTGTTC GGCGATACGG ACTCCGTGAA TGTGTTCTGT
GATGCCTCTG GCGTCATGCG TCTGGAGCAG CCGCTGGAGG GCGATACGGT GGAATCCGTC
CTGCAATACG TACAATTTTC CGCTACCGAC CTGCTGGCCC GTTATCAGAA GAAAGTGGAA
GCCTGCAGCC ATCTCGACGA TGCGGAGCGT CACGAGTTCC TACGGCAGTT TGCGGATGGG
CTGCATGGTT ATACGTATTT AACCGCCCAT CACCAGATCG AAGACCTGCC GTAG
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| Protein sequence | MTWSVADSRH LYNLPHWGEG YFDVGADGQI IVRPDANPQG AAVGLADVAA VLGEHSLGLP
CLLRFPQILG DRVARLHGAF GDAIRALDYK GSFTPVYPIK VNQQRRVVEE ILRAGAGSVG
LEAGSKPELL AVIGLMPVGG TIICNGYKDK EYIRLALTGE KLGMQVYLVV EKPSELPLIL
NEASRLGVKP RIGVRARLAS AGSGKWQNTG GEKSKFGLST ADILELVHRL RAENALDSLQ
LLHFHLGSQI PNIQFIRGGM RECARLYAEL RRLGAALEVV DVGGGLGVDY EGTHSRAYCS
TNYHVSDYAH AIVATLADVS RQEGLPEPRI ISESGRALTA HHAILVANVS DVEMAAGEHP
PSTPSADLMD GEWGRLLTRL DQGNAAAALE VYQEALYLLA EVHQQFNLGI IHIEGRAEAE
GIYAQLLWRV RGFLDPHNRA HRDILDELDE KLVDKYFVNF SLFQSLPDVW AIDQIFPIVP
IQRLNEEPTR RARLEDITCD SDGRIDAYVT AEGLTPALPV HALQEGRPYL LGIFLVGAYQ
EILGDMHNLF GDTDSVNVFC DASGVMRLEQ PLEGDTVESV LQYVQFSATD LLARYQKKVE
ACSHLDDAER HEFLRQFADG LHGYTYLTAH HQIEDLP
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