Gene Lferr_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1184 
Symbol 
ID6877157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1156558 
End bp1157037 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID642789061 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002219629 
Protein GI198283308 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.844824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAG AAACCATTAC CGTCGGTCAA CCCGCACCCC GGTTTCATGC CGCCGCCTAT 
GGCAAGGCGG CTTCCATCAG CCTCGATGAC CTGCGCGGAA AGGTTGTGGT GCTCTATTTC
TACCCCAAGG ATGACACGCC GGGTTGTACG ACAGAGGGCC AGGAGTTCAC GGCGCTCTAC
CCGGAATTCC AGGCCGCTGG CGCGGAAATT CTGGGGGTTT CCCGAGACAC CCTCGCCAGC
CATGAAAAGT TTTCCTGCAA GTTCAATTTC CCGTTCCCGC TCTTGGCTGA TACCGATGCA
GCACTTTGCA ACGCCTTTGA TGTGCTCAAG AAAAAGAACA ATTACGGCAA AGTCAGTATC
GGTGTCGAAC GCAGCACTTT CGTGATCGAC CGGGAGGGCA AAATCGCCTA CATCGGGCGC
AAGGTAAAGG CCGCCGGACA TGCAGCCGCC ATTCTGCAAA TCGTCAAGCA GCTACCATGA
 
Protein sequence
MSSETITVGQ PAPRFHAAAY GKAASISLDD LRGKVVVLYF YPKDDTPGCT TEGQEFTALY 
PEFQAAGAEI LGVSRDTLAS HEKFSCKFNF PFPLLADTDA ALCNAFDVLK KKNNYGKVSI
GVERSTFVID REGKIAYIGR KVKAAGHAAA ILQIVKQLP