| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1183 |
|---|
| Symbol | |
|---|
| ID | 6877156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1155964 |
|---|
| End bp | 1156440 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642789060 |
|---|
| Product | ferric uptake regulator, Fur family |
|---|
| Protein accession | YP_002219628 |
|---|
| Protein GI | 198283307 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.837957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATT CATCACTCCC CCACCCCCTC GCTGCAACAG TTTCCGATAC TGACGCGGCG
CAGCGTCTCC GCGCTGCCGG ACAACGTGTC ACACGTTTAC GGGTGGTGGT GTTCAAGACG
CTTCTGGAAG CTGAGCAACC CCTCAGTCAC CCCGAGCTCC AGCAGCGCCT GGAAGCCTCG
GAAACGGGGG GGGTGGATCG CGTCAGTCTC TACCGCAATC TGGAATGGCT GGTACAGATC
GGGCTGGCCC ACCGGATCAC GGCAGATGAC CGGGTATGGC GTTTCAGCGC CCGCCGTGCA
GAGATGGCCA CCCAACATCC GCATTTCCAC TGCGTCTCCT GCGGTCAGGT GTTCTGCCTG
CCGGAGAGCA GTGTACCGGC ACCCCGCTTG CCAGCCGACT ATTCCATGAT TGAAATGGAA
CTGGTGGTCA ACGGGGTCTG CGCCCACTGC GGGAAGGCAC CGCCCCCCAA AAACTGA
|
|---|
| Protein sequence | MAHSSLPHPL AATVSDTDAA QRLRAAGQRV TRLRVVVFKT LLEAEQPLSH PELQQRLEAS
ETGGVDRVSL YRNLEWLVQI GLAHRITADD RVWRFSARRA EMATQHPHFH CVSCGQVFCL
PESSVPAPRL PADYSMIEME LVVNGVCAHC GKAPPPKN
|
|---|
| |