Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1179 |
Symbol | |
ID | 6877152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1151739 |
End bp | 1153133 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642789056 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_002219624 |
Protein GI | 198283303 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.34468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCGT CGGCGCTGCC TGAGCTGGAG CGGCGTCTCC GGACGCGTCT GCAGGGGGAT CTGCGCCCAC CGCGGGGACG CTCCCTCTAT GTGGCTTACA GTGGCGGCGG GGACTCCACG GCGCTGCTCG TGGCACTGCT TTCTCTAGGG TACGAGATCC ATGCCTTGCA TGTGGATCAC GGCTGGCACC CGGACAGTGC GCAGTGGGCC CGGTTCTGTC AGGAGCAGGC CAAGGCTCTG GGGGTTCCTT TCACCCTGCT GCATCTGGCT GCAGATACAC CGGGCGAGGG GCCGGAGGAT CAGGCCCGGC GTGCCCGCTA TGCCCTCATG GCGGCGCAGT TGCGGCAGGG GGACTGGCTG TTCACGGCGC AGCACCGCGA AGATCAGGCG GAAACCGTGC TTTTGCAACT GTTGCGCGGT ACCGGCGTGG CGGGACTGGC GGGCATGCCC CGGCAGCGCC CGCTGGGAGC CGGGCTTCTG GTTCGGCCCC TGCTGGACGT ACCGCGGCAG GTGTTGCGGG ATTATCTGGA ACAGCGGCAG TTACCCTTTC TGAATGATCC GGCCAATGCC GATATGCGCT ACGACAGGGT GCGGATACGT CGCATCCTGC TCCCGCAACT GCAGGAACTG GGTTGGCCCC ACGCGACGAT CAGTATCGCC CGCGCTGCGG ACAATCTCGC CGACATGGGG GAAATCGCGA CGGACTGGTT TGACCTGTGT TGGCAACAGT ATCGGGCAGA CCATCCGGGT CTCTCTGTCG AGGTGCTTCC TCTGGAGTAT CTGCATACGC TTTCTGTTGC GGCACAGCGG TTTTTTTTGC GGGGCTGGCT TCAGAGTCTG CGGATATCCG TGCCGGGCCG GGAGCGTCTG GAGGCGCTGC GGGACGCGGT GATGCGGGGA CGCGGGGGCG CGAGGATTCA ATGGGAAGGG GGACAGGCTT GGCTGCAGGG TGGACTGCTG CGCGCCTGGC CACAACCGCG CGTTACGGCG GAAAAGGAAT GGGAAGCAGG CCCCTGGTGT GCCGCTCCGG GAAAACCGCT GCCGATCCCC GGCTGGCAGT GCGCCATCCG GGCCACGCCA CCGGCCGACC TTCATCACGC ATTGGCTGAG CGTTTTGCAG GGACGAGGCT ATACTGGCGC CGTCGCCGCC AGGGGGAACG CACCCTGAGC GGACAGGGAC AGCATCGGTC GCTGAAGAAA CTGCTGCTGG AGGCGGGGGT CCCACCGGAT CTGCGTGCGG ATGTGCCCCT GCTCTGGGAC GAAACGGGGC ATTTGCTAGT CATTCTGGGC TACTATACCG CACCCTGGGC GAGTGCCCCT CGCGGAGAAC CGGCACTCTG CCTCTGGAAT ACCGGTACTC AGTCCATCGC CGATAGTGGC GTCGGCTCGA TATAG
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Protein sequence | MESSALPELE RRLRTRLQGD LRPPRGRSLY VAYSGGGDST ALLVALLSLG YEIHALHVDH GWHPDSAQWA RFCQEQAKAL GVPFTLLHLA ADTPGEGPED QARRARYALM AAQLRQGDWL FTAQHREDQA ETVLLQLLRG TGVAGLAGMP RQRPLGAGLL VRPLLDVPRQ VLRDYLEQRQ LPFLNDPANA DMRYDRVRIR RILLPQLQEL GWPHATISIA RAADNLADMG EIATDWFDLC WQQYRADHPG LSVEVLPLEY LHTLSVAAQR FFLRGWLQSL RISVPGRERL EALRDAVMRG RGGARIQWEG GQAWLQGGLL RAWPQPRVTA EKEWEAGPWC AAPGKPLPIP GWQCAIRATP PADLHHALAE RFAGTRLYWR RRRQGERTLS GQGQHRSLKK LLLEAGVPPD LRADVPLLWD ETGHLLVILG YYTAPWASAP RGEPALCLWN TGTQSIADSG VGSI
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