| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1177 |
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| Symbol | |
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| ID | 6877150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1147273 |
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| End bp | 1150776 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642789054 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002219622 |
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| Protein GI | 198283301 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.906306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTA CGCCGCAGTT CGTCCATCTG CACGTACACT CCGAATACTC CCTGGAAGAC
GGAATCATTC CGGTCAAGGC GCTGGCCAGA CGCTGCGCGG AGCGAGGCAT GCCGGCCGTG
GCGATCACTG ATCACGGCAA CCTTTTTGCC CTGGTGAAAT TTTATAATGC TGCCCGGGGG
CAGGGCGTCA AGCCATTGAT TGGCAGTGAA GTCTGGGTGC ATGATGTGGC AGAACCGGAA
CGACCGGTCA GCCTTGTCCT GCTGTGCATG GACAAAACCG GTTACCGTAA CCTCAGCCGC
CTGCTCAGCC GGGCTTACCT GGAGGGCAGT CGCCACGGTC GTCCGCAGAT CGACGTGGCA
TGGCTGGAAG GGTCGAGCGA CGGTCTCATT GCCCTGTCTG CGGCAGGGCA GGGGGAGATC
GGGCGTGCCC TGCAGCGCCA TCCGCAACAG GCGGAAAGCC GGGCGCGATA CTACGCAAGG
CTTTTCCCGG AGCGTTTTTA TCTGGAGGTG CAGCGCAACG GTGAGGCGGA ACAGGAGGCC
CTGGTCCAGG CCACGGTGGC GCTGGCGGAA AAACTGGATT TACCGCTGGT GGCCACCAAT
AACGCCCACT TTCTCGATGC GGCGGACTTT GCGGCTTTCG ACGCGCGACA GTGTATTTCT
GCGGGCTTTA CCCTGGACGA CCCGCGCCGT CCACGGCGTT TTACGCCGGA GCACCGCCTG
CCGGACCCCG AAGAAATGCG AGAGCGTTTT GCGGACCTGC CGGAAGCTTG CGACAATACC
GTCGAAATTG CGCGACGCTG TAATATGGAG CTGGTGCTTG GGCATTATGC GCTACCGGAC
TACCCCATTC CCGCCAACCA GTCCGTGGAT GAATATTTGC ACGACGCGGC GCAAAAAGGT
CTGCAGGAAC GCTTGCAGGA GCTGCGTATC ACCGGCGACG CCACGCTGCC TTATCACGAG
CGCCTGTTGC GTGAGGTCGG CGTCATTCAG CAGATGGGCT TCCCCGGTTA TTTTCTCATC
GTCGCGGATT TCATCCAGTG GGCAAAAAAT AATGGCGTGC CGGTAGGACC TGGTCGTGGT
TCCGGCGCCG GATCGCTGGT GGCCTACGCA CTACGGATCA CCGATCTCGA TCCCATCGGC
AATGGCCTGT TGTTCGAGCG CTTTCTCAAT CCCGAACGCG TTTCCATGCC TGACTTCGAC
GTGGATTTCT GCATGGATCA GCGTGACCGC GTCATTCAGT ATGTGGCCGA CAAATACGGT
CGTGACCGGG TCGGCCAGAT CATCACCTTT GGGACGATGA AGGCGCGGGC GGTGGTGCGT
GATGTCGGCC GGGTGCTGGG TCTACCGTAT GGCTTTGTCG ACCAGTTGGC CAAGCTGGTG
CCGGGTGATC TGGGAATGAC CCTGGCGAAG GCCCTGGAGG AATCGGAGGA ACTGCGGCGA
CGCCAGGCTG AGGAAGACGA CGTCCGCGAC CTGCTGGACA TCGCCTTGCG CCTGGAGGGT
TTGCCCCGTC ACGCCTCGAC CCATGCGGGT GGCGTGGTGA TCTCCCCGGA GCCACTGGCC
GACCGCCTGC CGCTCTTTAA CGACGGCTCT GAAGGGGGGG GTAACGTCAC CCAGCTCGAT
AAGGACGATG TAGAAAAGAT GGGGTTGGTG AAGTTCGACT TTCTCGGCCT GCGTACCCTG
ACCATCATCG ATATGGCGGT CAAGCTCATC AATGCCGATG CGGCAGCGGC GGGTCGTGCG
CCCGTGGATA TTCAGCAATT GCCTTTGGAC GATGCGGCGA CTTTCGCCCT GCTCAAGTCC
ACCGAGACGG CGGCGGTCTT CCAACTGGAA TCATCGGGTA TGCGCGATCT GGTGCGGCGC
CTGCAGCCGG ATACTTTTGA AGATATCGTC GCCCTCGTCG CCCTGTTTCG GCCGGGGCCG
CTACAGTCGG GTATGGTGGA TGATTTCATC GCCCGCAAAC ACGGCAAGGC GCAGGTAACC
TATCTGCATC CGGATCTGGC ACCGATTCTC CGGGAAACCT ATGGGGTGAT TGTCTATCAG
GAACAGGTCA TGCAGTCCGC CCAGGCGCTG GCGGGTTATT CCCTCGGCGG TGCCGATTTA
CTGCGGCGCG CCATGGGCAA GAAAAAGCCG GAGGAAATGG CCAAGCAACG CAGCATTTTC
CTGGAGGGAG CCCACAAGAA CGGTTTGGCC GCGGACCAGG CCGGGGCCAT CTTCGACCTC
ATGGAAAAGT TTGCGGAATA TGGCTTTAAC AAATCCCACT CGGCAGCCTA TGCCCTGGTG
TCCTACCAAA CCGCTTATCT GAAGGCCCAC TATCCGCAGT TTTTTATGTC TGCCGTGCTG
ACCGCAGATA TGGACCACAC CGACAAAGTT GTGGCGATGA TTGCCGAGTG CGCGCGCATG
GGCCTGCGCA TTGCTCCACC GAGCGTTCAG CACAGTGTGC TGGAGTTCCG GCCGGAGGGG
GATGATCATA TCCGCTTTGG TCTGGGTGCC ATCAAGGGCT TGGGACGGGC GGCCATTCAG
GCGATTCTCG ACGCCCGTAG AGGAGGCGCC TTCCTGAATC TCTTCGATCT GCTCTGCCGG
GTGGATACCC AGAAAATCAA TCGTCGTGCC CTGGAGGCAT TGATTCGCGC CGGAGCCATG
GATGACTGGG GCGTGTCGCG GGCCAGCCTG ATCGCTTCCG TGGACGGTTG TATGGAAGCA
GCGGCGCAGT TTCAGAGCAG TCAGGCGAGC CTGCAGGAAT CATTGTTTAG CGGACAGGAA
GCGTTGCGGG TAGCGCCGCC GCTGGTGTCT GCCGAGGCAT GGAGCCTCAC CGAAACCCTG
CGTCAGGAAC GGGAAACTCT GGGCTTCTAT CTCAGTGGTC ACCCCATGGA CAGTCTGCGG
GATGATCTGA CGGCGCTGGG AACGATACCT CTTGGCGACG TCGCGGTCGG GTCCACGGTA
TTGGTGGCGG GGTTGGTGGT AGCGCGGCGC AGCACCCGGA CCAAGCGCGG TGATCGTATC
TATTTCCTGA CCCTCGACGA TGGTCAGGGG CGGCTGGAGG TCGTCGTCTT TGGCGAAGTC
TGGGCGCGGG CCGGCAAGAT CCGAGAGGGT GAGGAGCCGG TGCTGGTTCT GGGTGAGGTG
GGCGAGGACA GCTATTCTGG CGGCCTGCGG CTCAGTGCCC TGCGTCTGCT GGATACGGCA
CAGGCGCGTG AGGAATTGGC TGCCCAATTG ACCTTGGATC TGGGTCTTGC CGAAGATATG
GCGCCGCGAG ATCTGCTTGC CGTGCTCCGT AAGTATCCTG GCCAAACGGC CTTGCGCCTG
CGTTTGCGGG TCGCAGACGA CGTTGTCGCG CAATTGCGGG TGACGGAAAA CCTGAGCTTC
GCGGCGAGTC CCGCCGCCAT TGCCGCCCTG ACGGCGTTGG CACCCGCGGC GCACTGGCAC
TGGAGCTATC GGCCGGTGAC CCTTCTCGTC AATAATGTCG TCCCCCTGGA GCGTGCACGG
CACGCGACGC GACGCCCGGC CTGA
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| Protein sequence | MMRTPQFVHL HVHSEYSLED GIIPVKALAR RCAERGMPAV AITDHGNLFA LVKFYNAARG
QGVKPLIGSE VWVHDVAEPE RPVSLVLLCM DKTGYRNLSR LLSRAYLEGS RHGRPQIDVA
WLEGSSDGLI ALSAAGQGEI GRALQRHPQQ AESRARYYAR LFPERFYLEV QRNGEAEQEA
LVQATVALAE KLDLPLVATN NAHFLDAADF AAFDARQCIS AGFTLDDPRR PRRFTPEHRL
PDPEEMRERF ADLPEACDNT VEIARRCNME LVLGHYALPD YPIPANQSVD EYLHDAAQKG
LQERLQELRI TGDATLPYHE RLLREVGVIQ QMGFPGYFLI VADFIQWAKN NGVPVGPGRG
SGAGSLVAYA LRITDLDPIG NGLLFERFLN PERVSMPDFD VDFCMDQRDR VIQYVADKYG
RDRVGQIITF GTMKARAVVR DVGRVLGLPY GFVDQLAKLV PGDLGMTLAK ALEESEELRR
RQAEEDDVRD LLDIALRLEG LPRHASTHAG GVVISPEPLA DRLPLFNDGS EGGGNVTQLD
KDDVEKMGLV KFDFLGLRTL TIIDMAVKLI NADAAAAGRA PVDIQQLPLD DAATFALLKS
TETAAVFQLE SSGMRDLVRR LQPDTFEDIV ALVALFRPGP LQSGMVDDFI ARKHGKAQVT
YLHPDLAPIL RETYGVIVYQ EQVMQSAQAL AGYSLGGADL LRRAMGKKKP EEMAKQRSIF
LEGAHKNGLA ADQAGAIFDL MEKFAEYGFN KSHSAAYALV SYQTAYLKAH YPQFFMSAVL
TADMDHTDKV VAMIAECARM GLRIAPPSVQ HSVLEFRPEG DDHIRFGLGA IKGLGRAAIQ
AILDARRGGA FLNLFDLLCR VDTQKINRRA LEALIRAGAM DDWGVSRASL IASVDGCMEA
AAQFQSSQAS LQESLFSGQE ALRVAPPLVS AEAWSLTETL RQERETLGFY LSGHPMDSLR
DDLTALGTIP LGDVAVGSTV LVAGLVVARR STRTKRGDRI YFLTLDDGQG RLEVVVFGEV
WARAGKIREG EEPVLVLGEV GEDSYSGGLR LSALRLLDTA QAREELAAQL TLDLGLAEDM
APRDLLAVLR KYPGQTALRL RLRVADDVVA QLRVTENLSF AASPAAIAAL TALAPAAHWH
WSYRPVTLLV NNVVPLERAR HATRRPA
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