Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1175 |
Symbol | |
ID | 6877148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1145545 |
End bp | 1146672 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642789052 |
Product | lipid-A-disaccharide synthase |
Protein accession | YP_002219620 |
Protein GI | 198283299 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0763] Lipid A disaccharide synthetase |
TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.165605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGCAAGG CCTTTATCCT CGCGGTAGAG CGTTCCGGCG AAAATCTCGG GCTGGAAATT TTGGCGAATG CCGCGCAGGC GGGACTTGAT CTGCAATGGT CCGGGGTGGT CGGATCCCGT CTGCAGGCGG CGGGCGTGCA AAATATTGCC AATGGTGAAG TGCTGGCGAT GATCGGGTTG GTCGAAGTCT TGCGGCACTA CGGTCGCTTG CGCAGGCTTT ATGGGCAAAT CCGGCAGCAT CTGCAGGCGG AACGGCCGGC TTGCGTGGTG CTGATTGATC ATCCTGCTTT CAATCTGCAC GTTGCCAAGA TGGCCAAGCA GATGGGCATT CGAGTGCTCT ATGTGGTGGG TCCCCAGATC TGGGCCTGGC GCTCGCAGCG AATCCACCAG ATCAAGCGCG TAGTGGACCA CATGCTGGTG CTTTTTCCTT TTGAGGTGCC CATTTATGCA CAGGCGGGGG TGCCGGTGCA TGTGCTGGCC CATCCCTTGC TGGCGCAGAC TGCGACGGCG CAGGACGGAA TGGATGCGCG GGCGGCACTG GGACTGACGG CAGGGGGGCC GGTGCTTGCG CTCCTGCCGG GCAGTCGCCG CGGCGAGCTG GAACGTCTGA CTCTACGCTA TGCGGAAACG GCGCGACGTT TGCGCAAACA AATACCGGAT CTGCGGATTC TGGTGGCCTT GGCCAGGGAG GAGTTGCGCC CCCTCTGGGA GCGGCTCTGG AAACAGGGTG CGGGGCCGGA AGATGCGCAG TTGGTGGTCG CTCAGACGCA AACCGTGCTG GCAGCCGCTG ACGTGGTGCT GGTCGCCTCC GGTACCGCCA CACTGGAAAC GGCACTCATG CGGCGCCCGG CGGTCGTCGT CTATATTTTG AACGCACTCA CCTTTGCTTT CGTCCGAAGA CTGGTGAAGA CCCCCTTCGT GGCCATGCCC AATATTTTGC TCCAAGAGGC CGTATACCCG GAATTCCTCC AGGAGGCCTT CGAGCCCGCC CAAGTGGCTG ATGCACTGGC GGCGCTTTTG GGTCCGGCGG GTTCCGAGCA GGTGGCAAAA TTGCAGAAAC TGCGCAGCCT GCTGGAAGGC AATCCTCCCG AGCAGTTGCA GCAAGTGCTC CGGGAGATGC TGGCATGA
|
Protein sequence | MGKAFILAVE RSGENLGLEI LANAAQAGLD LQWSGVVGSR LQAAGVQNIA NGEVLAMIGL VEVLRHYGRL RRLYGQIRQH LQAERPACVV LIDHPAFNLH VAKMAKQMGI RVLYVVGPQI WAWRSQRIHQ IKRVVDHMLV LFPFEVPIYA QAGVPVHVLA HPLLAQTATA QDGMDARAAL GLTAGGPVLA LLPGSRRGEL ERLTLRYAET ARRLRKQIPD LRILVALARE ELRPLWERLW KQGAGPEDAQ LVVAQTQTVL AAADVVLVAS GTATLETALM RRPAVVVYIL NALTFAFVRR LVKTPFVAMP NILLQEAVYP EFLQEAFEPA QVADALAALL GPAGSEQVAK LQKLRSLLEG NPPEQLQQVL REMLA
|
| |