Gene Lferr_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1172 
Symbol 
ID6877145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1142665 
End bp1143447 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID642789049 
Productacyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 
Protein accessionYP_002219617 
Protein GI198283296 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.206007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGC AGATTCATCC GCTGGCCATC GTCGATTCCT CGGTTCAGAT TGGAGAAGGA 
TGCACCATCG GACCTTTTGC CGTCATTGGG GCTGGAGTGG AAATCGGCGA TCACTGCAGG
ATCGGCGCGA ATACCGTGAT CGAAGGCCCT TGCCGCCTCG GTGCCCATAA CCAAATTTTT
CAGTTTGCGT CCGTCGGCAC GGCTCCACAG GATCTGGGCT ACGCGGGTGA ACCTACGACA
CTCGAAATCG GGTCGCACAA TACGATACGC GAGTTTGTGA CCATCAATCG CGGCACTGTG
AAAGGTGGCG GGACAACACG GATCGGTCAT CACAACCTCC TCATGGCTTA CTGCCATGTG
GCGCACGACT GTTCTATCGG TGATCAGGTG GTAATGGCCA ATGCCGCAAC CCTTGCCGGT
CACGTCAGCG TCGAGGATCA CGCCATCCTC GGCGGCCTGT CGGCGGTACA TCAGTACGCT
CGGGTGGGGG CGCACGCGAT ATTGGGCGGC GGGACCATGG CACCTTTGGA TATCCCACCT
TTTATGATGG CAGCAGGCAA CCATGCCAGC CTGCATGGGA TCAATGTACG CGGTCTCGCA
CGTCGCGGTA TCCCCCGGGA GACCATCTTG CAGATCAAAC GGGCGTATCG CCTGCTTTTC
CGTTCCGGGC TGAGACTGGA GGATGCCATG GATGAGGTGT CGCAACGCGG TCTGAATGCG
CCGGAAGTCG CCTATCTTCT GGACTTTATT CGTAATAGCC GACGCGGGAT TACCCGGCCA
TGA
 
Protein sequence
MTVQIHPLAI VDSSVQIGEG CTIGPFAVIG AGVEIGDHCR IGANTVIEGP CRLGAHNQIF 
QFASVGTAPQ DLGYAGEPTT LEIGSHNTIR EFVTINRGTV KGGGTTRIGH HNLLMAYCHV
AHDCSIGDQV VMANAATLAG HVSVEDHAIL GGLSAVHQYA RVGAHAILGG GTMAPLDIPP
FMMAAGNHAS LHGINVRGLA RRGIPRETIL QIKRAYRLLF RSGLRLEDAM DEVSQRGLNA
PEVAYLLDFI RNSRRGITRP