| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1170 |
|---|
| Symbol | |
|---|
| ID | 6877143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1141168 |
|---|
| End bp | 1142229 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642789047 |
|---|
| Product | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase |
|---|
| Protein accession | YP_002219615 |
|---|
| Protein GI | 198283294 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG GCGTGTATCT CCTTGGCGAT CTTGCGCAGG TGGCAGGCGC TGAATTGCGC
GGCGACGCCG GGTATCAGAT CAGCGCTGTG GCGCCGCTCG ATACAGCCGG CAGTGGGGAT
CTCACTTTTT ATCACGACAT GCATTTGCGA GGTCTGTTAA AAACGAGCAA AGCAGGCGCC
ATACTGATTG CTCCCCGGGA CGCGGAGCAA TTTTCCGGAA ACCGCCTTTT GACGGACAAT
CCCTACGCGG CATTTGCGCG GGTCATGCAG CACATCTATC CGCAGGTTGC CCCTCGGCCC
GGATTGCATC ATACGGCACA ACTGGCGCGT GACGCCCAGG TGGATCCGGA CGCGCGCATC
GATGCGCATG TACAGATTGG AGCCGGAGCG GTGATTGCGA AAGGTGTCTG GCTGGAGGCC
GGTACCTTTG TTGGCGCGGG TGCGGAGGTG GGGCAGGGAT CACATCTTTA TCCCGGTGTG
AAGATTTATG GGGGCTGCAA AGTGGGCGCC GGCTGCGTCC TCCACGCGGG CGTGGTGATT
GGCGCCGATG GCTTTGGTTT TGCAGAGGCA GACGGCCGCT TTTTGAAGAT CCCCCAGGTG
GGTCGGGTAC TTATTGGAAA TAACGTGGAG GTTGGTGCCA ACTCCTGTAT CGACCGCGGT
GCGCTGGCCG ATACGGTGAT CGAAGACGGG GTGAAAATAG ACAATCTGGT GCAGATCGGA
CACAACGTCC AGATCGGCGC TCATACGGTT GTCGCTGGAC AGACAGGAAT TGCGGGGAGC
GCGCGGATTG GCCGGCACTG CCGTATCGGC GGTCAGGTGG GTATTGCCGG TCACCTGGAA
ATCGCCGATG GCTGTGTGAT CGCCGGGCAG AGCGCGGTGA CCCATTCCTT GCGTCGCGCC
GGTGTATATT CGGGGGTGAT CCCTGTACAA GAGGCAAGCC ACTGGAGACG TATCGCCGCG
CGTCTCGACG GACTGGATAC CTTGTTTCGC CGGATGAAGC GCGTCGAGCG TACACTTGAA
CAGGATTTAT CTACCAACGG AGAGCCCACT GACCGTGAAT GA
|
|---|
| Protein sequence | MARGVYLLGD LAQVAGAELR GDAGYQISAV APLDTAGSGD LTFYHDMHLR GLLKTSKAGA
ILIAPRDAEQ FSGNRLLTDN PYAAFARVMQ HIYPQVAPRP GLHHTAQLAR DAQVDPDARI
DAHVQIGAGA VIAKGVWLEA GTFVGAGAEV GQGSHLYPGV KIYGGCKVGA GCVLHAGVVI
GADGFGFAEA DGRFLKIPQV GRVLIGNNVE VGANSCIDRG ALADTVIEDG VKIDNLVQIG
HNVQIGAHTV VAGQTGIAGS ARIGRHCRIG GQVGIAGHLE IADGCVIAGQ SAVTHSLRRA
GVYSGVIPVQ EASHWRRIAA RLDGLDTLFR RMKRVERTLE QDLSTNGEPT DRE
|
|---|
| |