| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1168 |
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| Symbol | |
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| ID | 6877141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1138267 |
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| End bp | 1140612 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642789045 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_002219613 |
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| Protein GI | 198283292 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAT TCAGCCTCAG CTCCGCCCCC CTCATCTTCC TTTCCGCCGG AGTGGCTTGT
GTCACCGCCG CATGGGCAGC ACCGGCCTGG GCATTTACGC CCTTTACGGT CAGGAATATA
GAAATCCGTG GTCTGGAGCA TATCGCACCG GGCACGGTCT ACAACTACCT GCCCATTCAC
ATCGGCGAGC AGGTGGATGA TCAGAAGGCG CAGCAGGCCA TCAAGGATCT CTATTCCACG
GGATTCTTCA AGGATGTCAC CATCGCCCGT TCTGACAACA ATCTGCTGGT CATCGTGCAG
GAGCGGCCCA TCATCTCCAG CATCAAGATG ACGGGCATCA AGGCTTTTTC CAAAAGCGAA
GTGAACGGCA CGCTCAAGGG CGTCGGTCTG GTGGACAGGC ACATCTTTAA CCATTCGATC
CTGGATCAGG TGATTCATGG CCTGCAGGAG CAATACGAGG GCATGGGCTA TTACAACGCC
CGGATTCATG CGCGGGTGGA AAAACTGCCG CGCAATCGGG TAGCCATCCA TATCGATGCC
AAGGAAGGCG AGCAGGCGAC CATCAAGCAA GTGACCATTG TCGGTAATCA CGCCTTCAGT
GAAAGCCGCC TGCGTGGCCT TTTCAGTATC GGTGCGCCGG ATGCCTTTTC CTTCTTCACC
AAAAATGATC GTTACTCGCG TGAAAAACTC ATGAAGGGTC TGGAGAAACT GCATAACTTT
TATCTGGACC GGGGCTATCT CAACTTCGAT GTTGAATCCA CCCAGGTGCA GGTGACGCCC
GATCGCCGCT TCGTGTACAT CACCGTTAAC GTGCATGAGG GTAATCTCTA TCATATCCAG
TCGGTGGGCC TGACGGGTAA CCTGATCGTG CCGAGGCCGG AACTGGAAAA ACTGGTGGAG
ATCAAACCTG GCGAAGTGTT TTCCCGGGCC AAAATCAACG ACACCAATAG TGCCATTGCA
GATAAACTCG GAAACCTGGG TTACGCTTTC GCCAATACCA CACCGGTGCC CAAGGTGAAT
GAAAAAACGC ATGAGGTGGC GCTGAACTTC GAGGTGGATC CCGGCCGCAA GGTCTATATT
CGCCGTATCG AGATCACAGG CAATGACAAA AGCCGGGATT ATGTGGTCAG GCGCCAATTC
CGGCAGATGG AGGGTGCGCT TTATGATGGC TCGCTGATCC GGCGTTCCAA GATGCGTCTG
CAGCAAACGG GTTTTTACGA CAAGATCGAG ACAAAAACCG TGCCGGTCCC GGGGCATCCT
GACCAGTTGG ACCTGGATGT CCATGTACAC GAAAGGCCTA CAGGCAGTTT CAGTATCGGT
GTCGGCTACT CCAATGCCCA GGGTGTCCTA TTCAACGGCT CGATCAGCCA GAACAACTTT
ATGGGTACGG GTAACGCCCT GTCGTTCTCG GCTAACGTAG GCGGTCTGGG GACGGCGTAT
AACCTGTCTT TCACCGACCC ATATTTTACG CCGGACGGCA TCAGTCTGGG CGTTAATCTG
TATCGCAACG ATACCAACCT CTCTACCCTG ATGGTGGCTC CATATCAGGA GATCGATTAC
GGCGCGACCG TTACCCTGGG TATTCCGGTG ATGCAGTATG TCTACGATTA CATGTCATTG
GGGTTCAGCA ATACGAACAT CAACCTGACT TCTGGAAGCC CGCAAATATA TACTGATTAT
GTAAATAGAT TTGGCAATAC AGCCACGGCG GTGACGGTTG GCAACGATCT TACCTATGAC
AGCCGCAACT CACCGATTTT CCCCACCAAA GGGGTTTATG GGACTTTGTC GCTGAGGGCT
GCAGTACCTC CTGCAAAGCT CCGCTGGTAT AAGGCGGAGG TCAAAGGGGA ATATTATCAT
CCCATTACCT CCTGGCTGAC GGGCGGATTG AGCGGGCGCT ATGGTTTTAT CAACGGTTAT
GGCGGGCTAA GCGTGCCATT CTTTAATAAC TTCTATCTGG GTGGTCCAAC CACCTTGCCG
GGTTATCAGA CTTACGCTTT GGGCCCACAG ATAGGTGGTT ATCCGGTGGG TGGCACGCGC
GAGTTACTTT TCAACGCCAA TCTGTATTTC CCGCTGCCGG GTCTGGCGGA TAATAACAAC
TTCCGGATGT CGGTATTTCT CGCAAGTGGT TGGGTCTATG GCGTGAATTC CAACACGAAT
GGTTCAATAT ATAATTATAG CAATAACTAC TTCCCGAATT TAAGCGAGAT GCGGACGACG
GCGGGCGTCG GCTTCATGTG GATCAGCCCG ATGGGGCCGC TGCGCCTGTC TTTGGCCGTC
CCGTTAGACA AGAAGCCGGG TGACCTGACC CAGCCCTTGC AGTTTACTGT GGGTAACAAC
TTTTGA
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| Protein sequence | MKKFSLSSAP LIFLSAGVAC VTAAWAAPAW AFTPFTVRNI EIRGLEHIAP GTVYNYLPIH
IGEQVDDQKA QQAIKDLYST GFFKDVTIAR SDNNLLVIVQ ERPIISSIKM TGIKAFSKSE
VNGTLKGVGL VDRHIFNHSI LDQVIHGLQE QYEGMGYYNA RIHARVEKLP RNRVAIHIDA
KEGEQATIKQ VTIVGNHAFS ESRLRGLFSI GAPDAFSFFT KNDRYSREKL MKGLEKLHNF
YLDRGYLNFD VESTQVQVTP DRRFVYITVN VHEGNLYHIQ SVGLTGNLIV PRPELEKLVE
IKPGEVFSRA KINDTNSAIA DKLGNLGYAF ANTTPVPKVN EKTHEVALNF EVDPGRKVYI
RRIEITGNDK SRDYVVRRQF RQMEGALYDG SLIRRSKMRL QQTGFYDKIE TKTVPVPGHP
DQLDLDVHVH ERPTGSFSIG VGYSNAQGVL FNGSISQNNF MGTGNALSFS ANVGGLGTAY
NLSFTDPYFT PDGISLGVNL YRNDTNLSTL MVAPYQEIDY GATVTLGIPV MQYVYDYMSL
GFSNTNINLT SGSPQIYTDY VNRFGNTATA VTVGNDLTYD SRNSPIFPTK GVYGTLSLRA
AVPPAKLRWY KAEVKGEYYH PITSWLTGGL SGRYGFINGY GGLSVPFFNN FYLGGPTTLP
GYQTYALGPQ IGGYPVGGTR ELLFNANLYF PLPGLADNNN FRMSVFLASG WVYGVNSNTN
GSIYNYSNNY FPNLSEMRTT AGVGFMWISP MGPLRLSLAV PLDKKPGDLT QPLQFTVGNN
F
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