Gene Lferr_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1165 
Symbol 
ID6877138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1134909 
End bp1135724 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID642789042 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_002219610 
Protein GI198283289 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCCGTC AGCGACTGAT CACCGCATTC CTGTTATTCC TGCTGACCCT TGTGCTGATT 
TTTCGGGCAC CATTCTGGAT TTTCGTCGTT TTCCTCACGC TGGTGGCATT TCTGGGAGGG
CGGGAATGGG GCCACCTCAG CCTGATAGCA TGGCCGGGCG GGTTGGGCCT GATACTCGCA
GCGCTGATTC CTTCGCTACT CATGCTCCCG CAGCATCTTC CCTGGGTGTC CATGGCTCTG
GGCAGTGTGG TCTGGTGGAT GCTTCTCGCC ACAGGGCTGG TGCTGATGTC CCCCTCCCTG
TTACGCGATG CGCCAGCCTG GCAGCGCCCA TTGAGCGCCA TCACGGCGTT CCCGGTACTA
TTGCCTGCCC TGCTCTTCAG CGTGTCTTTG CAGCGATATG CCCCGCAGTT TTTATTGTGG
GTAATCCTTG TGATCAGTGC CGGCGACGTA GGCGCGATGG CTTCCGGTAA AATCTGGGGA
CGCCACCGGT TGGTACCGCG CATCAGCCCC GGCAAGACCT GGGAGGGACT GGTGGGTGGC
TTGCTTGCCA GCGCCATTAT GGGCACACTG GGCGCATGGA TATGGGTAGG TGCGGCCACC
CCGATACTCC TTTCCGGCAC CTTCTTGGGT CTGATTACGG GTGCTTTCGC GGTCTTGGGA
GATCTTTCCG AGAGTTTTTT GAAACGCCGC GCCGATAGCA AGGATAGTGG CCAGTTGTTG
CCGGGGCATG GCGGCCTGCT GGATCGCTTG GACAGCATGA GCGCAGGCAT CCCGGTGTTT
GTCGCCGGGC TTTATTTTCT GGATTGGTGG AAATGA
 
Protein sequence
MLRQRLITAF LLFLLTLVLI FRAPFWIFVV FLTLVAFLGG REWGHLSLIA WPGGLGLILA 
ALIPSLLMLP QHLPWVSMAL GSVVWWMLLA TGLVLMSPSL LRDAPAWQRP LSAITAFPVL
LPALLFSVSL QRYAPQFLLW VILVISAGDV GAMASGKIWG RHRLVPRISP GKTWEGLVGG
LLASAIMGTL GAWIWVGAAT PILLSGTFLG LITGAFAVLG DLSESFLKRR ADSKDSGQLL
PGHGGLLDRL DSMSAGIPVF VAGLYFLDWW K