Gene Lferr_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1163 
Symbol 
ID6877136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1133602 
End bp1134162 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID642789040 
Productribosome recycling factor 
Protein accessionYP_002219608 
Protein GI198283287 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTC AAGGAATCAA GAAAGATTCA GAAGCCCGGA TGAAGAAGAG CATCGAGTCG 
CTGAAGGGGG AGCTTACCCG GCTGCGTACC GGCCGGGCCA GTGCCGGTCT GCTGGATCAC
GTACAACTGG ACTACTACGG CGCGCCGACA CCACTGGCGC AGGTCGCTTC GGTTTCGGTG
GCGGATGCTC GCTCACTGCT GGTGACACCG TGGGAAAAGA ACCTGATTCC CAAAATTGAC
AAGGCCATTC GTGACGCCGG TCTGGGACTC AATCCGGTGG CGGGTTCGGA TAACGTTCGC
GTGCCCTTGC CGGCGCTTTC AGAGGAACGT CGTAAGGAAA TGGTAAAGGT GGTCCGGCAG
GAAGGGGAGG GCGCACGCGT GGCGATTCGG AACATCCGTC GCGACAGCAT TTCTCAGGTC
AAGGAACTCC ATAAGCAGAA AGCCATCTCC GAAGATGAAG AGCGACGGGC TGAGGAGGAG
TTTCAGAAGC TGACTGACCG GTATATTGAC GAAGTGGATG CTGTGGTGGA GGCCAAGGAA
GCTGACCTCA TGGAGGTCTG A
 
Protein sequence
MTIQGIKKDS EARMKKSIES LKGELTRLRT GRASAGLLDH VQLDYYGAPT PLAQVASVSV 
ADARSLLVTP WEKNLIPKID KAIRDAGLGL NPVAGSDNVR VPLPALSEER RKEMVKVVRQ
EGEGARVAIR NIRRDSISQV KELHKQKAIS EDEERRAEEE FQKLTDRYID EVDAVVEAKE
ADLMEV