Gene Lferr_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1155 
Symbol 
ID6877128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1126312 
End bp1127166 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content57% 
IMG OID642789032 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_002219600 
Protein GI198283279 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0383637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGG CCAGGAACGC CCGTTACCTG CGCCGCCGCT TCTGGAATAT CTTCAATCTG 
GGTATGGCCA TGGCAACGAC GCTGTTTGGC CTCTTCTGGC TGGTCTGGAT TCTTTGGACC
ACTCTCTCTT ATGGTGCTGG CGCCCTCAAC CTGGAACTGT TTACAGGTGA CACGCCGGCG
CCTGGCAGTA TCGGGGGCTT GCGCAATGCC TTCGTGGGCA GCCTGCTGAT GATCGGCGTG
GCGGTGATGA TTGGTACCCC TGTGGGAATC CTGGCCGGCA CCTATCTCGC GGAGTTTGCG
CAAGGCAGCC GACTCGCGGC AGTCATCCGT TTTTTTAATG ATATTCTGCT CAGCGCACCC
TCCATCGTGA TCGGTCTGTT TATTTACGCA GTGGTGGTGG TGCCCATGGG GAGCTTCTCG
GGTCTTGCCG GGGCTTTGTC ACTGGCTATT TTGCTTTTAC CGGTCGTCCT GCGCACTACG
GATGAGATGC TGGGCATGGT CCCTGGCACC ATGCGCGAGG CGGCTCTGGC CTTGGGAGCG
CCTCACTGGA AGATGATCGT TCAGGTGAGT TACCGGGCCG CACGTTCTGG TATACTCACC
GGGGTTCTAC TGGCGGTGGC GAGAATCAGT GGCGAGACCG CACCACTGCT GTTCACGGCG
CTCAGTAATC AGTTTTTCAG CACGAATCTG GACAAACCGA TCGCCAATGT CCCGGTAGTC
ATCTTTCAAT TTGCCATGAG TCCTTATCCG GAATGGCAGC ATCTGGCCTG GGCGGGCGCG
TTGATAGCTG CCATGGCTGT GCTAGTCTTG AGCCTTGTTT CCCGCTTTCT TATCAAAGAC
AGGAGCCCGC GTTAA
 
Protein sequence
MNTARNARYL RRRFWNIFNL GMAMATTLFG LFWLVWILWT TLSYGAGALN LELFTGDTPA 
PGSIGGLRNA FVGSLLMIGV AVMIGTPVGI LAGTYLAEFA QGSRLAAVIR FFNDILLSAP
SIVIGLFIYA VVVVPMGSFS GLAGALSLAI LLLPVVLRTT DEMLGMVPGT MREAALALGA
PHWKMIVQVS YRAARSGILT GVLLAVARIS GETAPLLFTA LSNQFFSTNL DKPIANVPVV
IFQFAMSPYP EWQHLAWAGA LIAAMAVLVL SLVSRFLIKD RSPR